iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043823

Ensembl Protein ID

GLYMA01G02350.3

UniProt Accession

I1J4W6; I1J4W6_SOYBN

Genbank Protein ID

KRH74432.1; KRH74433.1; KRH74434.1

Protein Name

Auxin-induced protein

Genbank Nucleotide ID

CM000834; CM000834; CM000834

Gene Name

GH1; GLYMA_01G019400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA01G02350	GLYMA01G02350.3	GLYMA01G02350.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.00e-16	62.5	239	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt..lt.........................elknsevalkYeDedGDlvtlksDedldkavs 68
           ++vkvs++g+++++++dl++++++++L +a+++  l                           l +se+ l+YeD+dGD++ l++D++++++++
   Q: 239  LFVKVSMDGAPYLRKVDLRSYTTYQELSSALEKmfLScftlgqcgshgapgremlsesklrdLLHGSEYVLTYEDKDGDWM-LVGDVPWEMFID 331
           58*******************************651167799*******************99999***************.************ PP
   S: 69   llaskksllrlliqk 83
                  ++rl i+k
   Q: 332  ------TCKRLKIMK 340
           ......899999997 PP

Organism

Glycine max

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MMSPPAVVTE EEGRSNVSST VASGSSQSLD RFSQNGAGLK ERNYLGLSDC SSVDSSASTV 60
PSLCDEKKEN MNLKATELRL GLPGSQSPER EPDLFSLSPA KLDEKPLFPL LPTKDGICLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTTTCCGT CTTAAGGTTT CATTCATTAA GCTTTCTCTT CTCATTTCTA TTTCTCTCTC 60
CCCAAAAGCT TTTGCTTCTT TCTGTATATG GAAGGCCCTT AAACTTTCTT TCTCTCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

gmx:547502

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005481	Arabidopsis lyrata	65.43	1.00e-112	399.00
IUUC-Ath-007607	Arabidopsis thaliana	65.74	9.00e-113	399.00
IUUC-Mtr-058323	Medicago truncatula	79.44	6.00e-149	520.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence