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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007586
UUCD1 version UUC-ArT-00859
Ensembl Protein ID AT5G66070.2
UniProt Accession Q9FKX5; NIPL1_ARATH
Genbank Protein ID BAB10412.1; AED98155.1; ANM70890.1; AAS99675.1; AAT47808.1
Protein Name NEP1-interacting protein-like 1; RING-H2 finger protein ATL27
Genbank Nucleotide ID AB011474; CP002688; CP002688; BT012531; BT014957
Gene Name ATL27; At5g66070; K2A18.15
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G66070 AT5G66070.5 AT5G66070.5
AT5G66070 AT5G66070.4 AT5G66070.4
AT5G66070 AT5G66070.2 AT5G66070.2
AT5G66070 AT5G66070.3 AT5G66070.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 2.20e-08 35.3 200 242
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
    C++Cl+df ++ +++lp C H+fh+ C+ kw +++++CPlCr
   Q: 200 CSVCLQDFqvgET-VRSLPhCHHMFHLPCIDKW------LRRHASCPLCR 242
    ********88555.*******************......**********8 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Up-regulated by chitin.
Up-regulated by chitin.
Protein Sequence
(Fasta)
MDGYYSLSPI SVLHRIKDSF HFAVSALLAN LFSALFTFFF ALVGTLLGAL TGALIGQETE 60
SGFIRGAAVG AISGAVFSIE VFESSLLLWQ SDESGIGCLL YLIDVIASLL SGRLVRERIG 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007586|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATCCACTCGT CGTCGTAAGA TATTTTCCTT TCGAATATTA AGAAAGATGA GACGCGTGAT 60
TATTAATTAA TAAAGAAACT TTCGGTCAGC GGAGAGAAGG TTCCTTTGCC TTTGGTCTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007586|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027367--Gly-zipper_YMGG
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13441--Gly-zipper_YMGG
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006952--P:defense response
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG ath:AT5G66070
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-006267 Arabidopsis lyrata 87.76 3.00e-99 353.00
IUUC-Bol-015652 Brassica oleracea 79.35 5.00e-97 346.00
Created Date 25-Jun-2017

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