iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078779

Ensembl Protein ID

OGLUM06G26900.3

UniProt Accession

A0A0E0ADL7; A0A0E0ADL7_9ORYZ

Protein Name

DNA repair protein REV1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM06G26900	OGLUM06G26900.1	OGLUM06G26900.1
OGLUM06G26900	OGLUM06G26900.3	OGLUM06G26900.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBM	28.67	2.00e-43	173.00	IUUC-Sce-106236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza glumaepatula

Functional Description
(View)

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents.

Protein Sequence
(Fasta)

MSASSSGGRG APPPATAASP GQKRPRGDDP ASPSNRSESA PAKNPRRAFS SSPFADFGSY 60
MAAKNSKLAA QFEADASTSA AEVTGGVFAG VSIFVDGFTV PSSQELKEIM LNNGGRFVNY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGCCT CCTCCTCCGG TGGCCGCGGC GCGCCGCCGC CGGCCACCGC CGCCTCGCCC 60
GGCCAGAAGC GGCCGAGGGG AGACGACCCC GCGTCGCCTT CCAACCGCTC CGAATCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0237--DNA synthesis
KW-0238--DNA-binding
KW-0548--Nucleotidyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR012112--REV1
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF16589--BRCT_2
PF00817--IMS
PF11799--IMS_C

SMART

SM00292--BRCT

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0016779--F:nucleotidyltransferase activity
GO:0042276--P:error-prone translesion synthesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	66.42	0.00e+00	705.00
IUUC-Aml-001185	Ailuropoda melanoleuca	33.02	1.00e-89	324.00
IUUC-Atr-002915	Amborella trichopoda	43.81	0.00e+00	791.00
IUUC-Apl-004054	Anas platyrhynchos	33.59	5.00e-86	312.00
IUUC-Aca-004304	Anolis carolinensis	31.73	2.00e-83	304.00
IUUC-Aly-005696	Arabidopsis lyrata	44.87	0.00e+00	778.00
IUUC-Ath-006893	Arabidopsis thaliana	45.71	0.00e+00	788.00
IUUC-Ago-007722	Ashbya gossypii	29.29	1.00e-49	191.00
IUUC-Acl-008347	Aspergillus clavatus	29.95	3.00e-95	342.00
IUUC-Afl-008444	Aspergillus flavus	30.35	8.00e-86	311.00
IUUC-Afu-008837	Aspergillus fumigatus	29.07	1.00e-92	334.00
IUUC-Ani-009188	Aspergillus nidulans	30.59	2.00e-87	317.00
IUUC-Ang-009866	Aspergillus niger	29.05	9.00e-95	341.00
IUUC-Aor-010107	Aspergillus oryzae	30.35	1.00e-85	311.00
IUUC-Ate-010359	Aspergillus terreus	33.49	3.00e-76	280.00
IUUC-Ame-010664	Astyanax mexicanus	33.67	8.00e-79	288.00
IUUC-Bgr-012244	Blumeria graminis	28.78	3.00e-86	313.00
IUUC-Bta-013405	Bos taurus	32.41	9.00e-79	288.00
IUUC-Bci-013849	Botrytis cinerea	35.31	7.00e-74	272.00
IUUC-Bdi-014066	Brachypodium distachyon	71.52	0.00e+00	1472.00
IUUC-Bol-015544	Brassica oleracea	45.16	0.00e+00	777.00
IUUC-Bra-017792	Brassica rapa	43.85	0.00e+00	776.00
IUUC-Cel-018148	Caenorhabditis elegans	30.88	1.00e-64	241.00
IUUC-Cja-019742	Callithrix jacchus	31.92	1.00e-54	208.00
IUUC-Cfa-020112	Canis familiaris	30.31	7.00e-107	381.00
IUUC-Cpo-022152	Cavia porcellus	30.84	2.00e-96	346.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	40.10	3.00e-71	262.00
IUUC-Csa-023504	Chlorocebus sabaeus	32.97	2.00e-82	300.00
IUUC-Cho-024780	Choloepus hoffmanni	40.57	5.00e-21	96.30
IUUC-Cin-025276	Ciona intestinalis	32.47	1.00e-100	360.00
IUUC-Csv-026283	Ciona savignyi	33.33	2.00e-69	256.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	28.18	8.00e-82	298.00
IUUC-Cne-027079	Cryptococcus neoformans	33.55	2.00e-66	247.00
IUUC-Cme-027346	Cyanidioschyzon merolae	32.75	5.00e-51	196.00
IUUC-Dre-028073	Danio rerio	37.12	3.00e-75	276.00
IUUC-Dno-030038	Dasypus novemcinctus	33.81	3.00e-91	329.00
IUUC-Dor-031100	Dipodomys ordii	30.83	8.00e-76	278.00
IUUC-Dse-031310	Dothistroma septosporum	29.72	3.00e-89	322.00
IUUC-Dme-031991	Drosophila melanogaster	32.22	3.00e-78	286.00
IUUC-Ete-033082	Echinops telfairi	31.08	7.00e-63	235.00
IUUC-Eca-033471	Equus caballus	33.12	3.00e-87	316.00
IUUC-Eeu-034993	Erinaceus europaeus	42.32	5.00e-69	255.00
IUUC-Fca-035367	Felis catus	30.93	2.00e-105	376.00
IUUC-Fal-036973	Ficedula albicollis	36.34	1.00e-72	268.00
IUUC-Fox-037677	Fusarium oxysporum	34.32	3.00e-76	280.00
IUUC-Fso-038252	Fusarium solani	29.48	2.00e-91	330.00
IUUC-Gmo-039669	Gadus morhua	36.48	1.00e-86	314.00
IUUC-Ggr-039988	Gaeumannomyces graminis	28.95	2.00e-87	317.00
IUUC-Gga-040423	Gallus gallus	33.07	8.00e-84	305.00
IUUC-Gac-042134	Gasterosteus aculeatus	36.32	5.00e-83	302.00
IUUC-Gma-042929	Glycine max	45.43	0.00e+00	853.00
IUUC-Ggo-044528	Gorilla gorilla	33.07	4.00e-84	306.00
IUUC-Hsa-046259	Homo sapiens	33.50	1.00e-83	304.00
IUUC-Hvu-047139	Hordeum vulgare	70.61	0.00e+00	682.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	33.07	5.00e-88	318.00
IUUC-Kpa-049169	Komagataella pastoris	33.64	5.00e-65	242.00
IUUC-Lch-050471	Latimeria chalumnae	37.04	1.00e-78	287.00
IUUC-Lpe-050800	Leersia perrieri	86.00	0.00e+00	1803.00
IUUC-Loc-052320	Lepisosteus oculatus	27.54	1.00e-48	187.00
IUUC-Lma-053149	Leptosphaeria maculans	29.14	6.00e-79	288.00
IUUC-Laf-053810	Loxodonta africana	33.87	9.00e-84	305.00
IUUC-Mcc-055574	Macaca mulatta	32.45	3.00e-82	300.00
IUUC-Meu-055945	Macropus eugenii	30.97	8.00e-33	135.00
IUUC-Mor-057195	Magnaporthe oryzae	28.59	5.00e-86	312.00
IUUC-Mpo-057488	Magnaporthe poae	28.80	7.00e-85	308.00
IUUC-Mtr-057955	Medicago truncatula	46.30	0.00e+00	852.00
IUUC-Mla-059027	Melampsora laricipopulina	34.01	6.00e-61	228.00
IUUC-Mga-060156	Meleagris gallopavo	33.70	3.00e-83	303.00
IUUC-Mvi-060398	Microbotryum violaceum	34.46	5.00e-69	256.00
IUUC-Mmr-061113	Microcebus murinus	33.64	2.00e-84	307.00
IUUC-Mdo-063001	Monodelphis domestica	30.21	4.00e-83	303.00
IUUC-Mmu-063180	Mus musculus	35.67	2.00e-79	290.00
IUUC-Mac-065551	Musa acuminata	44.08	9.00e-134	470.00
IUUC-Mpu-066525	Mustela putorius furo	32.08	8.00e-87	315.00
IUUC-Mlu-067877	Myotis lucifugus	32.05	3.00e-80	293.00
IUUC-Nfi-068418	Neosartorya fischeri	29.74	2.00e-95	343.00
IUUC-Ncr-068648	Neurospora crassa	35.05	2.00e-76	281.00
IUUC-Nle-069959	Nomascus leucogenys	36.49	3.00e-83	303.00
IUUC-Opr-070522	Ochotona princeps	35.79	9.00e-63	235.00
IUUC-Ont-072293	Oreochromis niloticus	30.30	3.00e-73	270.00
IUUC-Oan-073519	Ornithorhynchus anatinus	43.26	1.00e-77	285.00
IUUC-Ocu-074492	Oryctolagus cuniculus	34.72	2.00e-87	317.00
IUUC-Oba-075567	Oryza barthii	98.20	0.00e+00	2261.00
IUUC-Obr-076332	Oryza brachyantha	86.24	0.00e+00	1694.00
IUUC-Ogl-077348	Oryza glaberrima	99.07	0.00e+00	2212.00
IUUC-Oin-079738	Oryza indica	91.39	0.00e+00	2047.00
IUUC-Olo-080701	Oryza longistaminata	90.98	0.00e+00	2028.00
IUUC-Ome-081708	Oryza meridionalis	94.33	0.00e+00	2035.00
IUUC-Oni-082251	Oryza nivara	99.08	0.00e+00	2245.00
IUUC-Opu-083528	Oryza punctata	93.59	0.00e+00	2045.00
IUUC-Oru-084293	Oryza rufipogon	98.63	0.00e+00	2232.00
IUUC-Osa-085549	Oryza sativa	99.26	0.00e+00	2218.00
IUUC-Ola-086793	Oryzias latipes	37.27	4.00e-75	276.00
IUUC-Olu-087786	Ostreococcus lucimarinus	32.62	2.00e-70	259.00
IUUC-Oga-089006	Otolemur garnettii	32.96	8.00e-82	298.00
IUUC-Oar-089597	Ovis aries	36.29	1.00e-85	311.00
IUUC-Ptr-091520	Pan troglodytes	33.50	1.00e-83	304.00
IUUC-Pan-092333	Papio anubis	37.45	3.00e-82	300.00
IUUC-Psi-094004	Pelodiscus sinensis	35.95	1.00e-71	265.00
IUUC-Pma-094128	Petromyzon marinus	36.07	1.00e-50	194.00
IUUC-Pno-094849	Phaeosphaeria nodorum	33.33	4.00e-72	266.00
IUUC-Ppa-095714	Physcomitrella patens	49.91	1.00e-150	527.00
IUUC-Pfo-096569	Poecilia formosa	36.71	2.00e-74	274.00
IUUC-Pab-097960	Pongo abelii	36.49	5.00e-83	302.00
IUUC-Pop-098921	Populus trichocarpa	44.62	0.00e+00	822.00
IUUC-Pca-100509	Procavia capensis	31.93	4.00e-51	196.00
IUUC-Ppe-101730	Prunus persica	46.07	0.00e+00	851.00
IUUC-Pva-102142	Pteropus vampyrus	33.33	5.00e-82	299.00
IUUC-Pgr-103446	Puccinia graminis	30.67	3.00e-51	196.00
IUUC-Ptt-103849	Puccinia triticina	31.40	9.00e-57	215.00
IUUC-Pte-104128	Pyrenophora teres	35.20	3.00e-76	280.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	35.35	7.00e-77	281.00
IUUC-Rno-104871	Rattus norvegicus	31.65	4.00e-87	316.00
IUUC-Sce-106236	Saccharomyces cerevisiae	28.67	4.00e-44	172.00
IUUC-Sha-106962	Sarcophilus harrisii	33.23	4.00e-84	306.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	34.56	7.00e-75	275.00
IUUC-Spo-108170	Schizosaccharomyces pombe	36.54	4.00e-61	229.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	34.92	1.00e-79	291.00
IUUC-Smo-109554	Selaginella moellendorffii	41.21	8.00e-172	597.00
IUUC-Sit-110479	Setaria italica	64.91	0.00e+00	1255.00
IUUC-Sly-111752	Solanum lycopersicum	44.64	0.00e+00	847.00
IUUC-Sar-113304	Sorex araneus	33.65	1.00e-87	317.00
IUUC-Sbi-114196	Sorghum bicolor	63.98	0.00e+00	1251.00
IUUC-Sre-115151	Sporisorium reilianum	32.23	3.00e-68	253.00
IUUC-Ssc-116104	Sus scrofa	36.78	1.00e-81	298.00
IUUC-Tgu-117438	Taeniopygia guttata	33.12	8.00e-85	308.00
IUUC-Tru-118553	Takifugu rubripes	36.44	5.00e-73	269.00
IUUC-Tsy-119056	Tarsius syrichta	34.43	7.00e-86	311.00
IUUC-Tni-119933	Tetraodon nigroviridis	31.79	3.00e-108	386.00
IUUC-Tca-121376	Theobroma cacao	44.27	0.00e+00	854.00
IUUC-Tre-121972	Trichoderma reesei	29.69	3.00e-81	296.00
IUUC-Tvi-122342	Trichoderma virens	30.74	2.00e-85	310.00
IUUC-Tae-123898	Triticum aestivum	72.75	0.00e+00	1298.00
IUUC-Tur-126735	Triticum urartu	59.84	0.00e+00	1203.00
IUUC-Tme-126999	Tuber melanosporum	35.51	8.00e-76	278.00
IUUC-Tbe-127280	Tupaia belangeri	48.48	6.00e-31	129.00
IUUC-Ttr-129104	Tursiops truncatus	36.40	5.00e-81	296.00
IUUC-Uma-129562	Ustilago maydis	27.85	3.00e-68	253.00
IUUC-Vda-129862	Verticillium dahliae	29.29	4.00e-88	319.00
IUUC-Vpa-130819	Vicugna pacos	34.85	6.00e-44	172.00
IUUC-Vvi-131111	Vitis vinifera	46.87	0.00e+00	890.00
IUUC-Xtr-132629	Xenopus tropicalis	30.68	9.00e-101	361.00
IUUC-Xma-134065	Xiphophorus maculatus	32.72	3.00e-80	293.00
IUUC-Yli-134633	Yarrowia lipolytica	33.18	6.00e-65	242.00
IUUC-Zma-135176	Zea mays	71.59	0.00e+00	1340.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence