iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131257

Ensembl Protein ID

VIT_07s0141g00270.t01

UniProt Accession

D7SQK0; D7SQK0_VITVI

Genbank Protein ID

CBI17931.3

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

FN594965

Gene Name

VIT_07s0141g00270

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0141g00270	VIT_07s0141g00270.t01	VIT_07s0141g00270.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.40e-19	69.4	98	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllr 78
           + vkvs++g+++++++dl+++ ++ +Ll+a++  ++          ++++s++++ YeD+dGD++ l++D+++++++s      s++r
   Q: 98   MYVKVSMDGAPYLRKIDLKVYKSYPELLNALENmFKfrigeysereGYNGSDYTPAYEDKDGDWM-LVGDVPWEMFIS------SCKR 178
           579******************************6448899999999*******************.************......**** PP
   S: 79   lliqk 83
           l+i+k
   Q: 179  LRIMK 183
           ****8 PP

Organism

Vitis vinifera

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEKPVVYDNG LNLEATELRL GLPGTNEPEK QSSTSVRSKK RASPEMAEET RSKSSSCISD 60
ADDDAPPPKA QVVGWPPVRS YRKNSFQQRK GEAEGAGMYV KVSMDGAPYL RKIDLKVYKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGCAAACA CTTCTTCATC ATTACAACTC TTGATCGGAA TTCAAAAACA TCTCACCGGA 60
AAAATCATCG GGAAAAATGG AGAAGCCAGT GGTTTACGAT AACGGACTTA ATCTTGAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

vvi:100264878

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002618	Amborella trichopoda	59.28	4.00e-57	213.00
IUUC-Aly-006269	Arabidopsis lyrata	66.67	4.00e-68	249.00
IUUC-Ath-007238	Arabidopsis thaliana	66.67	1.00e-68	250.00
IUUC-Afl-008472	Aspergillus flavus	29.85	9.90e-01	28.10
IUUC-Aor-010089	Aspergillus oryzae	29.85	1.00e+00	28.10
IUUC-Bol-015312	Brassica oleracea	65.61	4.00e-69	252.00
IUUC-Bra-018063	Brassica rapa	66.14	4.00e-69	252.00
IUUC-Gma-042959	Glycine max	74.21	1.00e-74	271.00
IUUC-Mtr-058771	Medicago truncatula	68.09	6.00e-68	248.00
IUUC-Mac-064820	Musa acuminata	63.98	1.00e-61	228.00
IUUC-Pan-092358	Papio anubis	52.94	2.70e+00	25.40
IUUC-Pop-098896	Populus trichocarpa	74.60	5.00e-72	262.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence