iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114231

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G470100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g044060	Sb01g044060.1	Sb01g044060.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	65.31	6.00e-04	41.20	IUUC-Ath-007127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPTIQRAEMG GAGAGVPRRP GEAVEVTELQ LRIQLLGGGG GVGGAGSGSY NINDNADILA 60
EILSRLDGRS LAAAACVCRL WAAVARRDAV WEALCLRHVG PPAPPAAAGP ATRAVVAALG 120

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Nucleotide Sequence
(Fasta)

CTCGGTCGGT TCCTCACTCA GTCACCTCCA CTCCCCCTCC CCCGCGCTCT GCCTCTGCAC 60
GTACGTATGC CAACGATACA GCGTGCAGAG ATGGGTGGCG CAGGCGCAGG CGTGCCGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0000151--C:ubiquitin ligase complex
GO:0009740--P:gibberellic acid mediated signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0009937--P:regulation of gibberellic acid mediated signaling pathway
GO:0048831--P:regulation of shoot system development

KEGG

sbi:SORBI_01g044060

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002846	Amborella trichopoda	36.25	1.00e-08	51.60
IUUC-Aly-005539	Arabidopsis lyrata	46.41	9.00e-23	98.20
IUUC-Ath-007127	Arabidopsis thaliana	46.41	6.00e-23	99.00
IUUC-Bdi-014290	Brachypodium distachyon	71.43	2.00e-26	111.00
IUUC-Bol-015233	Brassica oleracea	45.75	2.00e-21	94.00
IUUC-Bra-017984	Brassica rapa	46.41	8.00e-23	98.60
IUUC-Gma-043632	Glycine max	46.50	8.00e-24	101.00
IUUC-Lpe-050816	Leersia perrieri	71.58	5.00e-25	106.00
IUUC-Mtr-057946	Medicago truncatula	45.45	3.00e-20	90.10
IUUC-Ogl-077474	Oryza glaberrima	78.71	6.00e-21	92.80
IUUC-Ogu-079029	Oryza glumaepatula	78.71	6.00e-21	92.80
IUUC-Oin-080121	Oryza indica	78.71	6.00e-21	92.80
IUUC-Ome-081968	Oryza meridionalis	95.92	3.00e-12	62.00
IUUC-Oni-082552	Oryza nivara	78.71	6.00e-21	92.80
IUUC-Opu-083746	Oryza punctata	75.28	7.00e-24	102.00
IUUC-Oru-084658	Oryza rufipogon	78.71	6.00e-21	92.80
IUUC-Osa-086295	Oryza sativa	78.71	6.00e-21	92.80
IUUC-Pop-099566	Populus trichocarpa	55.68	3.00e-20	89.70
IUUC-Ppe-102106	Prunus persica	56.82	5.00e-21	92.80
IUUC-Sly-111364	Solanum lycopersicum	56.82	1.00e-23	101.00
IUUC-Stu-112502	Solanum tuberosum	56.82	1.00e-23	101.00
IUUC-Tae-124891	Triticum aestivum	72.53	3.00e-26	110.00
IUUC-Vvi-130926	Vitis vinifera	46.99	2.00e-22	97.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence