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Tag Content
UUCD2 ID IUUC-Pop-098979
UUCD1 version UUC-PoT-01131
Ensembl Protein ID POPTR_0005s23320.1
UniProt Accession B9H8A4; B9H8A4_POPTR
Genbank Protein ID EEE94590.1
Protein Name tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog
Genbank Nucleotide ID CM000341
Gene Name POPTRDRAFT_1079098; POPTR_0005s23320g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0005s23320 POPTR_0005s23320.1 POPTR_0005s23320.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.20e-17 61.6 200 242
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt+ v+claf      + ++lvsGs+D t+++WD+ +g+ll 
   Q: 200  GHTEFVSCLAFlvtvdyPQGFLVSGSGDSTVRLWDINSGTLLD 242
           8*************8876699**************99998875 PP
   
Organism Populus trichocarpa
Functional Description
(View)

Functional Description


     Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.
 Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.
Protein Sequence
(Fasta)
MEDTQPEGGE NNRDVEVAPA LISVHPTQDS VAVAVGSDLR FFDLRGNCGV TLVDETGEAF 60
HKDSIRAIRY GAKGKLFVSA GDDKLVKVWS TDSWRCIASV CSEKRVSAVA ISNDGLYVCF 120
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Protein Fasta Sequence


>IUUC-Pop-098979|E3,WD_repeat|Populus trichocarpa
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Nucleotide Sequence
(Fasta)
GAACTCTTCT TGTTTGTTGT CTGTTTAACA GAAAATAAAA ATGGAGGACA CTCAACCTGA 60
AGGAGGAGAA AACAACAGAG ACGTAGAGGT AGCTCCGGCC CTAATTTCAG TTCACCCGAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-098979|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR028884--Trm82
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043527--C:tRNA methyltransferase complex
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation
KEGG pop:POPTR_0005s23320g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000556 Aegilops tauschii 48.94 3.00e-94 338.00
IUUC-Atr-002431 Amborella trichopoda 50.38 2.00e-30 123.00
IUUC-Apl-003975 Anas platyrhynchos 34.76 2.00e-18 86.30
IUUC-Aca-005170 Anolis carolinensis 31.55 3.00e-15 75.50
IUUC-Aly-005769 Arabidopsis lyrata 60.14 7.00e-143 499.00
IUUC-Ath-006733 Arabidopsis thaliana 59.58 4.00e-138 483.00
IUUC-Acl-008151 Aspergillus clavatus 40.54 4.00e-10 58.90
IUUC-Afl-008518 Aspergillus flavus 27.85 6.00e-14 71.20
IUUC-Aor-010133 Aspergillus oryzae 27.46 8.00e-15 74.70
IUUC-Ame-010613 Astyanax mexicanus 31.63 2.00e-19 89.70
IUUC-Bgr-012067 Blumeria graminis 35.24 2.00e-11 63.20
IUUC-Bta-012788 Bos taurus 34.95 6.00e-21 94.70
IUUC-Bdi-014458 Brachypodium distachyon 52.70 1.00e-103 369.00
IUUC-Bol-016398 Brassica oleracea 57.40 9.00e-131 459.00
IUUC-Bra-016644 Brassica rapa 59.45 6.00e-140 491.00
IUUC-Cpo-021963 Cavia porcellus 34.95 3.00e-20 92.00
IUUC-Csa-024148 Chlorocebus sabaeus 35.33 5.00e-13 68.60
IUUC-Cne-026834 Cryptococcus neoformans 30.15 5.00e-13 68.90
IUUC-Dre-028427 Danio rerio 37.95 2.00e-22 99.40
IUUC-Dor-030522 Dipodomys ordii 34.95 3.00e-20 92.00
IUUC-Dme-032136 Drosophila melanogaster 34.96 1.00e-12 67.00
IUUC-Fca-035833 Felis catus 33.33 3.00e-20 92.40
IUUC-Fal-037497 Ficedula albicollis 32.62 2.00e-17 82.40
IUUC-Gga-040547 Gallus gallus 34.22 6.00e-18 84.70
IUUC-Gac-041761 Gasterosteus aculeatus 33.68 2.00e-20 92.80
IUUC-Gma-043722 Glycine max 62.04 3.00e-136 478.00
IUUC-Ggo-045340 Gorilla gorilla 35.33 6.00e-12 64.70
IUUC-Hsa-046403 Homo sapiens 35.14 3.00e-13 69.30
IUUC-Hvu-047643 Hordeum vulgare 52.47 6.00e-111 393.00
IUUC-Itr-048103 Ictidomys tridecemlineatus 35.48 6.00e-21 94.70
IUUC-Kpa-049283 Komagataella pastoris 31.41 3.00e-15 75.90
IUUC-Lch-050682 Latimeria chalumnae 34.84 1.00e-25 110.00
IUUC-Lpe-050712 Leersia perrieri 50.79 6.00e-113 400.00
IUUC-Loc-052599 Lepisosteus oculatus 32.51 4.00e-23 102.00
IUUC-Laf-054390 Loxodonta africana 36.22 7.00e-23 100.00
IUUC-Mcc-054747 Macaca mulatta 34.78 8.00e-13 67.80
IUUC-Mtr-058600 Medicago truncatula 58.69 1.00e-131 462.00
IUUC-Mla-059135 Melampsora laricipopulina 28.78 3.00e-20 92.80
IUUC-Mga-059876 Meleagris gallopavo 33.69 5.00e-18 84.70
IUUC-Mvi-060359 Microbotryum violaceum 26.98 4.00e-14 72.40
IUUC-Mmr-061518 Microcebus murinus 35.14 2.00e-19 89.40
IUUC-Mac-065625 Musa acuminata 55.42 3.00e-116 411.00
IUUC-Nle-069914 Nomascus leucogenys 34.05 2.00e-11 62.80
IUUC-Ont-071555 Oreochromis niloticus 34.43 5.00e-20 91.70
IUUC-Oan-072951 Ornithorhynchus anatinus 32.62 5.00e-20 91.30
IUUC-Ocu-074679 Oryctolagus cuniculus 35.68 3.00e-14 72.40
IUUC-Oba-075355 Oryza barthii 47.79 1.00e-100 359.00
IUUC-Obr-076769 Oryza brachyantha 52.14 1.00e-120 425.00
IUUC-Ogl-077168 Oryza glaberrima 52.22 3.00e-116 411.00
IUUC-Ogu-078275 Oryza glumaepatula 47.55 3.00e-99 355.00
IUUC-Oin-079207 Oryza indica 52.22 3.00e-116 411.00
IUUC-Ome-081169 Oryza meridionalis 36.98 7.00e-60 224.00
IUUC-Oni-082437 Oryza nivara 48.02 9.00e-100 356.00
IUUC-Opu-084031 Oryza punctata 52.22 6.00e-114 404.00
IUUC-Oru-084380 Oryza rufipogon 47.79 5.00e-100 357.00
IUUC-Osa-085327 Oryza sativa 52.22 6.00e-116 410.00
IUUC-Ola-086716 Oryzias latipes 31.56 4.00e-24 105.00
IUUC-Olu-087708 Ostreococcus lucimarinus 37.08 4.00e-35 141.00
IUUC-Oar-090239 Ovis aries 34.95 6.00e-21 94.40
IUUC-Ptr-090851 Pan troglodytes 35.14 5.00e-12 65.10
IUUC-Pan-092558 Papio anubis 35.33 5.00e-13 68.60
IUUC-Psi-093792 Pelodiscus sinensis 30.18 2.00e-18 86.30
IUUC-Ppa-095757 Physcomitrella patens 40.79 3.00e-72 265.00
IUUC-Pfo-096465 Poecilia formosa 30.08 9.00e-20 90.50
IUUC-Pab-097722 Pongo abelii 34.05 2.00e-14 72.80
IUUC-Pca-100753 Procavia capensis 46.88 1.00e-15 76.60
IUUC-Ppe-101515 Prunus persica 68.86 3.00e-164 570.00
IUUC-Sja-107780 Schizosaccharomyces japonicus 24.39 2.00e-14 73.20
IUUC-Spo-108251 Schizosaccharomyces pombe 25.99 3.00e-13 68.90
IUUC-Smo-108938 Selaginella moellendorffii 41.50 7.00e-72 264.00
IUUC-Sit-110020 Setaria italica 52.93 2.00e-116 411.00
IUUC-Sly-111543 Solanum lycopersicum 59.77 3.00e-152 530.00
IUUC-Stu-111925 Solanum tuberosum 59.77 7.00e-153 533.00
IUUC-Sbi-114061 Sorghum bicolor 52.48 7.00e-117 413.00
IUUC-Tgu-117321 Taeniopygia guttata 31.55 1.00e-13 70.10
IUUC-Tru-118454 Takifugu rubripes 33.33 1.00e-21 96.70
IUUC-Tni-119894 Tetraodon nigroviridis 32.63 8.00e-20 90.90
IUUC-Tca-121746 Theobroma cacao 70.16 3.00e-169 587.00
IUUC-Tae-124459 Triticum aestivum 52.94 5.00e-112 397.00
IUUC-Tur-126254 Triticum urartu 47.99 2.00e-87 315.00
IUUC-Tbe-127683 Tupaia belangeri 51.16 4.00e-15 75.10
IUUC-Ttr-129056 Tursiops truncatus 34.69 5.00e-21 94.70
IUUC-Vvi-131428 Vitis vinifera 67.73 5.00e-174 603.00
IUUC-Xma-133605 Xiphophorus maculatus 30.80 9.00e-19 87.40
Created Date 25-Jun-2017

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