iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006514

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_891463

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_104257.1	scaffold_104257.1	scaffold_104257.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.90e-14	54.3	24	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 274  ekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYk 336
            ++ Y L++v+vH G  +ssGHY+ yv+  +  W+++dD +V +v+e+ vl    ++aY+++Y 
   Q: 24   APEHYTLYGVIVHVGeLISSGHYYYYVRT-SSAWYCLDDYRVFKVSEKAVLD---AKAYIMLYA 83
           3889***********99************.888*******************...********6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGYIVASYKM RGSLILLAEE GTGAPEHYTL YGVIVHVGEL ISSGHYYYYV RTSSAWYCLD 60
DYRVFKVSEK AVLDAKAYIM LYALDRQETS NGAEMSQINT ADDAEREKCE AGVGKATGKP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGAGTTGTA TTTGGTTTGA CGATGGGATA CATAGTGGCT TCATACAAGA TGCGTGGTTC 60
ATTGATACTT TTGGCCGAAG AAGGCACGGG CGCACCAGAA CATGTTAGCT CACTCATTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_891463

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence