iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+++d    + l+ CgHvfh+ C+  w        ++++CP Cr
   Q: 80   CPICLEEYEDDhqIRRLRnCGHVFHLLCIDSW------LTQKQNCPSCR 122
           ********66433443446*************......999999****8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDTIDEILIG FSIIGLIVIV IANCCDNIDP PPTRLPPETI HQTVQPQQDI ETGQSKALVF 60
KDIKEEEGGR EEEGGGKRFC PICLEEYEDD HQIRRLRNCG HVFHLLCIDS WLTQKQNCPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATACTA TTGACGAAAT TCTCATTGGT TTCTCCATCA TCGGCTTGAT CGTCATCGTG 60
ATTGCTAACT GTTGCGACAA TATAGATCCC CCTCCCACGA GATTACCTCC CGAGACAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT1G51930

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005722	Arabidopsis lyrata	73.64	1.00e-44	170.00
IUUC-Bol-016278	Brassica oleracea	55.81	7.00e-33	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence