iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015506

Ensembl Protein ID

Bo1g158920.1

UniProt Accession

A0A0D3AG69; A0A0D3AG69_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g158920	Bo1g158920.1	Bo1g158920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.30e-12	46.4	1328	1374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC++Cg  ++d+ s++ C+ C+  +H  Cl+++     p+ + w+Cp+C 
   Q: 1328 VCKICGVDKDDD-SVLLCDTCDAEYHTYCLNPP-LIRIPDGN-WYCPSCV 1374
           8*****999977.7*******************.9******6.******6 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MELTDSTKKQ LGETRSAALD EDNRSFLGID LNEIPTGATP GGAVQDDDGE YEPVEVVRSI 60
HDNPDPAPGA PAEVPEPDRD AACGACGRPE SMELVVVCDA CERGFHLSCV NDGVEAPPSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAACTCA CTGATTCTAC GAAAAAGCAA CTCGGAGAGA CCAGGAGCGC CGCTCTCGAC 60
GAAGATAATC GCTCCTTTCT CGGCATCGAT CTTAACGAAA TCCCTACCGG CGCTACTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR016177--DNA-bd_dom
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR001739--Methyl_CpG_DNA-bd
IPR028942--WHIM1_dom
IPR028941--WHIM2_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51543--FYRC
PS51542--FYRN
PS50982--MBD
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF05964--FYRN
PF01429--MBD
PF00628--PHD
PF15612--WHIM1
PF15613--WSD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006097	Arabidopsis lyrata	78.82	0.00e+00	3303.00
IUUC-Ath-007218	Arabidopsis thaliana	78.29	0.00e+00	3230.00
IUUC-Bra-017998	Brassica rapa	93.16	0.00e+00	3960.00
IUUC-Sce-106207	Saccharomyces cerevisiae	42.31	2.00e-11	64.70
IUUC-Sha-107506	Sarcophilus harrisii	44.74	2.00e-13	72.00
IUUC-Tur-126242	Triticum urartu	35.89	0.00e+00	967.00
IUUC-Xtr-132008	Xenopus tropicalis	39.36	5.00e-14	73.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence