iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113926

UUCD1 version

UUC-SoB-00425

Ensembl Protein ID

Sb02g019373.1

UniProt Accession

A0A1B6PTU2; A0A1B6PTU2_SORBI

Genbank Protein ID

KXG29061.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G205800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g019373	Sb02g019373.1	Sb02g019373.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.00e-09	39.2	47	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
            C  Cg+g++   +l+ C+ C++ fH  Cl +   + +p  + w+Cp+Crs
   Q: 47   RCEACGSGEAAP-ELMLCDGCDRGFHIFCLRPI-LPRVPAGN-WYCPSCRS 94
           699999999876.6******************9.*******6.******96 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

PAGHLGSRVL RQMGAAGQLR RRTHARTLPR PRPEAAAAAA GDDDDVRCEA CGSGEAAPEL 60
MLCDGCDRGF HIFCLRPILP RVPAGNWYCP SCRSPASSKS QS 102

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGCCGGCC ATCTCGGATC TCGCGTGCTT AGGCAGATGG GCGCCGCGGG CCAGCTCCGT 60
CGCCGGACCC ACGCGCGGAC GCTGCCACGG CCAAGACCGG AAGCCGCCGC CGCCGCTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001214--SET_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50280--SET
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	52.00	1.00e-12	68.90
IUUC-Aly-006097	Arabidopsis lyrata	62.50	5.00e-09	57.40
IUUC-Ath-007218	Arabidopsis thaliana	62.50	8.00e-09	56.60
IUUC-Pgr-103434	Puccinia graminis	57.78	3.00e-13	68.90
IUUC-Sly-111298	Solanum lycopersicum	53.33	6.00e-11	63.50
IUUC-Tur-126632	Triticum urartu	52.00	9.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence