iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005609

Ensembl Protein ID

scaffold_300868.1

UniProt Accession

D7L6J6; D7L6J6_ARALL

Genbank Protein ID

EFH58782.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_896898

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_300868.1	scaffold_300868.1	scaffold_300868.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.80e-09	36.8	74	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydr 29
           +peef+Cp+s+elMrdPvvl+sG+  ++
   Q: 74   CPEEFRCPLSNELMRDPVVLASGQQQEA 101
           79*********************98776 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAKTGVFDSD PTAIAKAKEL KREMKKLLIK IEDEDDFGVQ TIDQLQEALS ALREATMRKM 60
AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQQQE ARLRNPCVIP LLIDALRRGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGCGGTGG ATCCGACGGC GATGGCGAAG ACCGGTGTTT TCGATTCGGA TCCGACGGCG 60
ATTGCGAAAG CCAAAGAACT GAAGCGTGAG ATGAAGAAGC TGCTGATTAA GATCGAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_896898

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence