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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007105
UUCD1 version UUC-ArT-01078
Ensembl Protein ID AT3G18130.1
UniProt Accession Q9LV28; GPLPC_ARATH
Genbank Protein ID BAB02025.1; AEE76051.1; AAK91355.1; AAM26650.1
Protein Name Receptor for activated C kinase 1C; Guanine nucleotide-binding protein subunit beta-like protein C
Genbank Nucleotide ID AB020749; CP002686; AY050338; AY101529
Gene Name RACK1C; At3g18130; MRC8.11
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G18130 AT3G18130.1 AT3G18130.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
iRefIndexPINAHINTMentha
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-46 154.9 147 182
UBD/Beta-Prp 5.70e-77 259.7 10 160
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWDlrt 32
           gH+++v+c++f  ++  +++vs+s+D+t+kvW+l  
   Q: 147  GHKEWVSCVRFspNTlvPTIVSASWDKTVKVWNLQN 182
           8***********5446667**************865 PP
   

   UBD/Beta-Prp
   S: 5    lkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgheds 96
           ++ +h++ +t+++  ++++++++t+srd++i++w++t+ ++      r+l gh+ +v +v +s+dg++ ++gs D+ +++wdl tg++++ + gh+++
   Q: 10   IMRAHTDIVTAIATpIDNSDIIVTASRDKSIILWKLTKDDKsygvaQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKD 107
           7899**********************************99999**9**************************************************** PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpd 148
           vls++fs ++  +vs+s+drti++w++   +c ++    +gh+++v+cv+++p+
   Q: 108  VLSVAFSTDNRQIVSASRDRTIKLWNTLG-ECKYTisEGDGHKEWVSCVRFSPN 160
           *************************7754.44444358899**********995 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Minor component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways. Involved in multiple hormone responses and developmental processes (PubMed:18947417). MAPK cascade scaffolding protein involved in the protease IV and ArgC signaling pathway but not the flg22 pathway (PubMed:25731164).
 Minor component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways. Involved in multiple hormone responses and developmental processes (PubMed:18947417). MAPK cascade scaffolding protein involved in the protease IV and ArgC signaling pathway but not the flg22 pathway (PubMed:25731164).
Protein Sequence
(Fasta)
MAEGLVLKGI MRAHTDIVTA IATPIDNSDI IVTASRDKSI ILWKLTKDDK SYGVAQRRLT 60
GHSHFVEDVV LSSDGQFALS GSWDGELRLW DLATGETTRR FVGHTKDVLS VAFSTDNRQI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007105|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCTGACTCGG AAACTCCGGC CCAAATGAGC CAGTCTCCTC GCAGAAACCA CACTAAACCC 60
TAATTTGATT CATTTTTAGA CCTAGAGTAT AAATACCAAA CATTTCAATC GACCTCGTAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007105|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein
KW-0807--Transducer
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005730--C:nucleolus
GO:0005078--F:MAP-kinase scaffold activity
GO:0004871--F:signal transducer activity
GO:0071215--P:cellular response to abscisic acid stimulus
GO:0009967--P:positive regulation of signal transduction
GO:0048364--P:root development
GO:0009845--P:seed germination
GO:0048367--P:shoot system development
KEGG ath:AT3G18130
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001935 Ailuropoda melanoleuca 66.25 2.00e-125 441.00
IUUC-Apl-003918 Anas platyrhynchos 69.34 1.00e-116 411.00
IUUC-Aca-004869 Anolis carolinensis 66.25 2.00e-125 441.00
IUUC-Aly-005671 Arabidopsis lyrata 96.02 0.00e+00 635.00
IUUC-Afl-008684 Aspergillus flavus 60.68 2.00e-116 411.00
IUUC-Ani-009221 Aspergillus nidulans 60.68 1.00e-116 411.00
IUUC-Ang-009843 Aspergillus niger 60.37 7.00e-116 409.00
IUUC-Aor-010193 Aspergillus oryzae 60.68 2.00e-116 411.00
IUUC-Ate-010420 Aspergillus terreus 61.56 1.00e-107 382.00
IUUC-Ame-010884 Astyanax mexicanus 65.63 4.00e-125 440.00
IUUC-Bta-013357 Bos taurus 66.25 2.00e-125 441.00
IUUC-Bol-016231 Brassica oleracea 92.94 7.00e-180 622.00
IUUC-Bra-016879 Brassica rapa 92.64 2.00e-178 617.00
IUUC-Cja-019914 Callithrix jacchus 66.25 2.00e-125 441.00
IUUC-Cfa-020755 Canis familiaris 66.25 2.00e-125 441.00
IUUC-Cpo-022377 Cavia porcellus 66.25 6.00e-126 442.00
IUUC-Cre-022909 Chlamydomonas reinhardtii 68.40 2.00e-134 470.00
IUUC-Csa-023025 Chlorocebus sabaeus 66.25 1.00e-125 442.00
IUUC-Cme-027251 Cyanidioschyzon merolae 57.59 4.00e-111 393.00
IUUC-Dre-028669 Danio rerio 65.33 5.00e-125 439.00
IUUC-Dno-029470 Dasypus novemcinctus 56.04 1.00e-92 332.00
IUUC-Dor-031098 Dipodomys ordii 58.51 1.00e-91 328.00
IUUC-Dse-031255 Dothistroma septosporum 61.61 2.00e-117 414.00
IUUC-Ete-033182 Echinops telfairi 59.39 4.00e-74 270.00
IUUC-Eca-033296 Equus caballus 68.87 8.00e-60 221.00
IUUC-Eeu-034771 Erinaceus europaeus 63.47 5.00e-119 419.00
IUUC-Fca-036315 Felis catus 66.25 2.00e-125 441.00
IUUC-Fal-036990 Ficedula albicollis 61.38 2.00e-64 238.00
IUUC-Gmo-039630 Gadus morhua 65.20 5.00e-123 433.00
IUUC-Gga-040540 Gallus gallus 66.25 2.00e-125 441.00
IUUC-Gma-042872 Glycine max 86.50 1.00e-169 587.00
IUUC-Ggo-045253 Gorilla gorilla 66.25 2.00e-125 441.00
IUUC-Hsa-046809 Homo sapiens 66.25 2.00e-125 441.00
IUUC-Itr-048025 Ictidomys tridecemlineatus 66.25 2.00e-125 441.00
IUUC-Lpe-050762 Leersia perrieri 71.01 6.00e-136 476.00
IUUC-Loc-052163 Lepisosteus oculatus 65.63 1.00e-124 438.00
IUUC-Lma-053113 Leptosphaeria maculans 60.99 1.00e-115 408.00
IUUC-Laf-054422 Loxodonta africana 66.25 2.00e-125 441.00
IUUC-Mcc-055348 Macaca mulatta 66.25 1.00e-125 441.00
IUUC-Meu-056543 Macropus eugenii 66.25 8.00e-126 442.00
IUUC-Mtr-058808 Medicago truncatula 86.50 3.00e-168 583.00
IUUC-Mga-059387 Meleagris gallopavo 66.25 2.00e-125 441.00
IUUC-Mvi-060392 Microbotryum violaceum 64.40 9.00e-119 418.00
IUUC-Mmr-061141 Microcebus murinus 60.68 9.00e-92 328.00
IUUC-Mdo-062932 Monodelphis domestica 66.25 2.00e-125 441.00
IUUC-Mmu-064132 Mus musculus 66.25 2.00e-125 441.00
IUUC-Mpu-066721 Mustela putorius furo 65.33 1.00e-121 428.00
IUUC-Mlu-068221 Myotis lucifugus 65.63 8.00e-115 405.00
IUUC-Nle-069865 Nomascus leucogenys 66.25 1.00e-125 442.00
IUUC-Opr-071100 Ochotona princeps 55.11 1.00e-93 335.00
IUUC-Oan-072788 Ornithorhynchus anatinus 66.25 2.00e-125 441.00
IUUC-Ocu-073844 Oryctolagus cuniculus 63.78 2.00e-119 421.00
IUUC-Oba-075981 Oryza barthii 67.07 6.00e-123 432.00
IUUC-Obr-076099 Oryza brachyantha 67.25 1.00e-132 464.00
IUUC-Ogl-077181 Oryza glaberrima 71.22 6.00e-136 476.00
IUUC-Ogu-078035 Oryza glumaepatula 71.22 6.00e-136 476.00
IUUC-Oin-079327 Oryza indica 71.22 6.00e-136 476.00
IUUC-Olo-081084 Oryza longistaminata 71.22 6.00e-136 476.00
IUUC-Ome-081612 Oryza meridionalis 71.22 6.00e-136 476.00
IUUC-Opu-083308 Oryza punctata 71.22 7.00e-136 475.00
IUUC-Oru-084200 Oryza rufipogon 71.22 6.00e-136 476.00
IUUC-Osa-085488 Oryza sativa 71.22 6.00e-136 476.00
IUUC-Oga-088811 Otolemur garnettii 66.25 2.00e-125 441.00
IUUC-Oar-089962 Ovis aries 66.25 2.00e-125 441.00
IUUC-Ptr-091340 Pan troglodytes 66.25 2.00e-125 441.00
IUUC-Pan-091946 Papio anubis 66.25 1.00e-125 442.00
IUUC-Pma-094535 Petromyzon marinus 65.63 2.00e-124 437.00
IUUC-Pfo-097311 Poecilia formosa 64.40 2.00e-124 437.00
IUUC-Pab-097863 Pongo abelii 66.25 1.00e-125 442.00
IUUC-Pca-100594 Procavia capensis 65.63 3.00e-124 437.00
IUUC-Pva-102746 Pteropus vampyrus 52.62 1.00e-91 328.00
IUUC-Pte-104026 Pyrenophora teres 60.99 1.00e-115 408.00
IUUC-Pyt-104584 Pyrenophora triticirepentis 60.99 7.00e-116 409.00
IUUC-Rno-104964 Rattus norvegicus 66.25 2.00e-125 441.00
IUUC-Sce-106224 Saccharomyces cerevisiae 46.77 6.00e-84 303.00
IUUC-Sha-107409 Sarcophilus harrisii 66.25 2.00e-125 441.00
IUUC-Spo-108297 Schizosaccharomyces pombe 58.46 4.00e-110 390.00
IUUC-Sit-110060 Setaria italica 69.44 1.00e-135 475.00
IUUC-Sar-113173 Sorex araneus 66.25 2.00e-125 441.00
IUUC-Sbi-114610 Sorghum bicolor 71.22 1.00e-134 472.00
IUUC-Ssc-116218 Sus scrofa 63.78 7.00e-122 429.00
IUUC-Tru-118202 Takifugu rubripes 64.71 2.00e-123 434.00
IUUC-Tni-120260 Tetraodon nigroviridis 64.40 3.00e-123 434.00
IUUC-Tbe-128021 Tupaia belangeri 50.95 8.00e-52 195.00
IUUC-Ttr-128637 Tursiops truncatus 57.28 4.00e-102 363.00
IUUC-Uma-129634 Ustilago maydis 62.85 1.00e-119 421.00
IUUC-Vpa-130410 Vicugna pacos 53.85 2.00e-74 271.00
IUUC-Xtr-132105 Xenopus tropicalis 65.94 8.00e-126 442.00
IUUC-Xma-133875 Xiphophorus maculatus 64.71 1.00e-124 438.00
Created Date 25-Jun-2017

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