iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016655

Ensembl Protein ID

Bra038220.1-P

UniProt Accession

M4FAV5; M4FAV5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra038220	Bra038220.1	Bra038220.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-19	68.8	97	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H+ +v+c+++     + +++Gs+D+t+k+WD+
   Q: 97   HEKPVRCVEYsyaA-GQVITGSWDKTVKCWDP 127
           999*******6432.88**************7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSQPPPSAGR ELANPPSDGI SNLRFSNTSD HLLVSSWDKR VRLYDVSTNS LKGEFLHGGA 60
VLDCCFHDDS SGFSVGSDNK VRRIVFNVGK EDVLGMHEKP VRCVEYSYAA GQVITGSWDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTCAGC CTCCTCCGTC CGCCGGTCGT GAGCTCGCGA ATCCTCCGTC CGACGGCATC 60
TCCAATCTCA GATTTTCCAA CACGAGCGAC CATCTCCTCG TTTCTTCATG GGATAAGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000776--C:kinetochore
GO:0005828--C:kinetochore microtubule
GO:0009524--C:phragmoplast
GO:0007094--P:mitotic spindle assembly checkpoint

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000710	Aegilops tauschii	80.26	9.00e-109	386.00
IUUC-Atr-002511	Amborella trichopoda	83.88	9.00e-175	605.00
IUUC-Aly-006428	Arabidopsis lyrata	94.93	0.00e+00	669.00
IUUC-Ath-007030	Arabidopsis thaliana	93.53	0.00e+00	668.00
IUUC-Acl-008120	Aspergillus clavatus	44.35	1.00e-74	273.00
IUUC-Ame-011039	Astyanax mexicanus	54.04	2.00e-102	365.00
IUUC-Bci-013818	Botrytis cinerea	47.18	7.00e-78	283.00
IUUC-Bdi-014928	Brachypodium distachyon	84.29	2.00e-172	597.00
IUUC-Bol-015262	Brassica oleracea	99.70	0.00e+00	681.00
IUUC-Cre-022964	Chlamydomonas reinhardtii	50.88	1.00e-88	319.00
IUUC-Cin-025561	Ciona intestinalis	51.85	3.00e-96	344.00
IUUC-Dse-031530	Dothistroma septosporum	38.78	4.00e-58	218.00
IUUC-Dme-031609	Drosophila melanogaster	46.46	5.00e-82	297.00
IUUC-Ete-032903	Echinops telfairi	58.92	2.00e-60	225.00
IUUC-Fso-038165	Fusarium solani	42.57	6.00e-72	264.00
IUUC-Gma-042865	Glycine max	85.93	1.00e-172	598.00
IUUC-Lpe-051670	Leersia perrieri	85.20	7.00e-176	608.00
IUUC-Mtr-058803	Medicago truncatula	85.63	4.00e-177	613.00
IUUC-Mlu-067466	Myotis lucifugus	56.60	1.00e-106	379.00
IUUC-Ncr-068899	Neurospora crassa	42.21	4.00e-73	267.00
IUUC-Ont-072515	Oreochromis niloticus	53.11	9.00e-103	366.00
IUUC-Oba-075450	Oryza barthii	85.50	2.00e-175	607.00
IUUC-Obr-076202	Oryza brachyantha	85.50	1.00e-175	608.00
IUUC-Ogl-077809	Oryza glaberrima	85.50	2.00e-175	607.00
IUUC-Ogu-078034	Oryza glumaepatula	80.11	5.00e-171	593.00
IUUC-Oin-079586	Oryza indica	85.50	2.00e-175	607.00
IUUC-Olo-080351	Oryza longistaminata	79.94	8.00e-154	535.00
IUUC-Oni-082048	Oryza nivara	85.50	2.00e-175	607.00
IUUC-Opu-083951	Oryza punctata	85.50	2.00e-175	608.00
IUUC-Oru-084904	Oryza rufipogon	85.50	2.00e-175	607.00
IUUC-Osa-085399	Oryza sativa	85.20	1.00e-174	605.00
IUUC-Pma-094724	Petromyzon marinus	52.48	2.00e-101	361.00
IUUC-Pfo-096256	Poecilia formosa	53.42	6.00e-103	367.00
IUUC-Pop-099107	Populus trichocarpa	87.69	1.00e-175	608.00
IUUC-Pca-100326	Procavia capensis	57.32	7.00e-82	296.00
IUUC-Ppe-101462	Prunus persica	87.35	3.00e-174	603.00
IUUC-Ssl-108521	Sclerotinia sclerotiorum	41.39	2.00e-42	165.00
IUUC-Sit-110412	Setaria italica	83.60	6.00e-161	559.00
IUUC-Sly-111541	Solanum lycopersicum	85.40	1.00e-170	592.00
IUUC-Stu-112371	Solanum tuberosum	85.09	3.00e-170	590.00
IUUC-Sar-113159	Sorex araneus	44.17	5.00e-57	213.00
IUUC-Sbi-114880	Sorghum bicolor	85.20	1.00e-173	601.00
IUUC-Tni-120539	Tetraodon nigroviridis	53.56	9.00e-102	362.00
IUUC-Tca-121027	Theobroma cacao	88.31	3.00e-177	613.00
IUUC-Tae-123002	Triticum aestivum	84.50	5.00e-170	589.00
IUUC-Tur-126282	Triticum urartu	83.18	3.00e-110	390.00
IUUC-Uma-129496	Ustilago maydis	33.87	2.00e-46	179.00
IUUC-Vvi-131671	Vitis vinifera	86.45	3.00e-176	610.00
IUUC-Xma-134127	Xiphophorus maculatus	53.42	7.00e-103	366.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence