iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-086463

Ensembl Protein ID

ENSORLP00000002972.1

UniProt Accession

H2LAR0; H2LAR0_ORYLA

Genbank Protein ID

ENSORLP00000002972

Protein Name

WD repeat-containing protein 55

Genbank Nucleotide ID

BAAF04096635

Gene Name

wdr55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000002390.1	ENSORLT00000002973.1	ENSORLP00000002972.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-20	72.5	128	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtg 33
           H++ +++l + ++++l++G d gt+kvWD+r+g
   Q: 128  HAAAINSLLLvDENILATGDDRGTLKVWDMRKG 160
           9999***977555****************9987 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

TDPPETNSEP DLSQPEPADS DADEPVGPKI RETPEDIRLE AIANTVALHP SRDVLVCGDV 60
DGDVYAYAYS CTEGETRELW SSGHHLKSCR QVRFSADGLK LFSVSRDKAV HQLDVERGQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGGAGCAC GCTGCCACCG GGTCTGAGCA GACAGATCCT CCAGAAACGA ACTCAGAACC 60
GGACCTTTCC CAGCCAGAAC CGGCAGATTC AGATGCGGAC GAGCCGGTCG GACCGAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	38.00	2.00e-47	182.00
IUUC-Aml-001768	Ailuropoda melanoleuca	63.48	1.00e-135	476.00
IUUC-Atr-002764	Amborella trichopoda	32.53	3.00e-21	94.40
IUUC-Apl-003880	Anas platyrhynchos	59.55	1.00e-108	387.00
IUUC-Aca-005060	Anolis carolinensis	65.03	3.00e-139	489.00
IUUC-Aly-006484	Arabidopsis lyrata	33.66	2.00e-41	162.00
IUUC-Ath-006652	Arabidopsis thaliana	35.88	3.00e-52	198.00
IUUC-Ago-007944	Ashbya gossypii	22.77	6.00e-10	58.90
IUUC-Bta-013497	Bos taurus	61.11	2.00e-131	461.00
IUUC-Bdi-014378	Brachypodium distachyon	34.36	4.00e-51	194.00
IUUC-Bol-016352	Brassica oleracea	35.88	6.00e-53	201.00
IUUC-Bra-017103	Brassica rapa	35.88	4.00e-54	204.00
IUUC-Cel-018192	Caenorhabditis elegans	25.74	2.00e-15	76.30
IUUC-Cja-018792	Callithrix jacchus	63.87	1.00e-136	479.00
IUUC-Cfa-020739	Canis familiaris	61.20	3.00e-135	475.00
IUUC-Cpo-022331	Cavia porcellus	63.32	6.00e-136	476.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	35.05	1.00e-32	132.00
IUUC-Csa-023414	Chlorocebus sabaeus	60.99	1.00e-135	475.00
IUUC-Cho-024600	Choloepus hoffmanni	61.79	8.00e-124	436.00
IUUC-Cin-025565	Ciona intestinalis	38.78	3.00e-66	245.00
IUUC-Csv-026294	Ciona savignyi	38.55	2.00e-65	242.00
IUUC-Cne-026979	Cryptococcus neoformans	31.42	3.00e-37	149.00
IUUC-Cme-027192	Cyanidioschyzon merolae	26.24	1.00e-17	84.30
IUUC-Dre-028492	Danio rerio	70.38	2.00e-142	498.00
IUUC-Dno-030050	Dasypus novemcinctus	61.16	6.00e-126	444.00
IUUC-Dor-030386	Dipodomys ordii	53.65	1.00e-109	389.00
IUUC-Dme-032012	Drosophila melanogaster	33.24	2.00e-56	213.00
IUUC-Ete-032491	Echinops telfairi	63.74	2.00e-137	481.00
IUUC-Eca-033583	Equus caballus	62.32	3.00e-134	472.00
IUUC-Eeu-034976	Erinaceus europaeus	65.15	7.00e-122	429.00
IUUC-Fca-036417	Felis catus	62.54	5.00e-133	467.00
IUUC-Gmo-039505	Gadus morhua	78.72	7.00e-166	576.00
IUUC-Ggr-039978	Gaeumannomyces graminis	25.95	3.00e-15	76.30
IUUC-Gga-040732	Gallus gallus	64.14	4.00e-134	470.00
IUUC-Gac-041313	Gasterosteus aculeatus	85.71	6.00e-177	613.00
IUUC-Gma-044122	Glycine max	37.21	4.00e-55	207.00
IUUC-Ggo-044748	Gorilla gorilla	61.26	8.00e-136	476.00
IUUC-Hsa-046943	Homo sapiens	61.26	1.00e-135	476.00
IUUC-Hvu-047659	Hordeum vulgare	34.64	1.00e-51	196.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	63.74	1.00e-135	476.00
IUUC-Lch-050331	Latimeria chalumnae	60.81	9.00e-117	412.00
IUUC-Lpe-051193	Leersia perrieri	35.41	1.00e-53	203.00
IUUC-Loc-051946	Lepisosteus oculatus	73.85	5.00e-148	518.00
IUUC-Laf-054035	Loxodonta africana	63.09	6.00e-136	476.00
IUUC-Mcc-055285	Macaca mulatta	63.58	3.00e-64	237.00
IUUC-Meu-056596	Macropus eugenii	63.14	2.00e-129	455.00
IUUC-Mor-056995	Magnaporthe oryzae	26.74	3.00e-13	69.30
IUUC-Mpo-057482	Magnaporthe poae	25.57	1.00e-14	74.30
IUUC-Mtr-058637	Medicago truncatula	37.95	3.00e-56	212.00
IUUC-Mga-059839	Meleagris gallopavo	61.75	7.00e-90	325.00
IUUC-Mdo-062868	Monodelphis domestica	64.29	4.00e-133	469.00
IUUC-Mmu-064305	Mus musculus	61.77	4.00e-136	477.00
IUUC-Mac-065041	Musa acuminata	34.67	4.00e-53	201.00
IUUC-Mpu-066779	Mustela putorius furo	61.73	8.00e-128	449.00
IUUC-Mlu-067223	Myotis lucifugus	63.48	5.00e-133	468.00
IUUC-Nle-069852	Nomascus leucogenys	62.90	1.00e-133	469.00
IUUC-Ont-072452	Oreochromis niloticus	86.09	0.00e+00	629.00
IUUC-Oan-073163	Ornithorhynchus anatinus	60.00	1.00e-51	195.00
IUUC-Ocu-074628	Oryctolagus cuniculus	61.77	2.00e-135	475.00
IUUC-Oba-075868	Oryza barthii	35.47	9.00e-53	200.00
IUUC-Obr-076768	Oryza brachyantha	35.52	1.00e-53	203.00
IUUC-Ogl-077424	Oryza glaberrima	35.47	3.00e-54	205.00
IUUC-Ogu-078847	Oryza glumaepatula	35.47	7.00e-53	200.00
IUUC-Oin-079495	Oryza indica	35.47	3.00e-54	205.00
IUUC-Olo-080268	Oryza longistaminata	35.47	9.00e-53	200.00
IUUC-Ome-081709	Oryza meridionalis	35.85	7.00e-47	181.00
IUUC-Oni-082749	Oryza nivara	35.47	3.00e-54	205.00
IUUC-Opu-084023	Oryza punctata	29.55	4.00e-36	144.00
IUUC-Oru-084764	Oryza rufipogon	35.47	7.00e-53	200.00
IUUC-Osa-086009	Oryza sativa	35.47	3.00e-54	205.00
IUUC-Olu-087897	Ostreococcus lucimarinus	32.76	1.00e-41	163.00
IUUC-Oga-089114	Otolemur garnettii	62.06	9.00e-136	476.00
IUUC-Ptr-090556	Pan troglodytes	61.26	7.00e-136	476.00
IUUC-Pan-092828	Papio anubis	61.26	4.00e-136	477.00
IUUC-Psi-093609	Pelodiscus sinensis	63.06	3.00e-117	416.00
IUUC-Pma-094413	Petromyzon marinus	55.81	6.00e-105	374.00
IUUC-Ppa-095422	Physcomitrella patens	35.74	5.00e-56	211.00
IUUC-Pfo-096389	Poecilia formosa	80.84	1.00e-174	605.00
IUUC-Pab-098095	Pongo abelii	61.54	6.00e-136	476.00
IUUC-Pop-099612	Populus trichocarpa	35.18	4.00e-51	194.00
IUUC-Pca-100408	Procavia capensis	63.25	6.00e-134	470.00
IUUC-Ppe-101931	Prunus persica	36.54	3.00e-50	191.00
IUUC-Pva-102549	Pteropus vampyrus	62.18	1.00e-134	472.00
IUUC-Rno-105079	Rattus norvegicus	61.75	2.00e-137	483.00
IUUC-Sha-107299	Sarcophilus harrisii	64.37	2.00e-125	442.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	27.49	5.00e-19	88.20
IUUC-Spo-108122	Schizosaccharomyces pombe	30.14	2.00e-24	106.00
IUUC-Smo-109613	Selaginella moellendorffii	35.07	4.00e-49	188.00
IUUC-Sit-110263	Setaria italica	37.50	1.00e-54	206.00
IUUC-Sly-110988	Solanum lycopersicum	32.89	2.00e-46	179.00
IUUC-Stu-112713	Solanum tuberosum	33.22	2.00e-47	182.00
IUUC-Sbi-114617	Sorghum bicolor	37.15	2.00e-52	199.00
IUUC-Sre-115136	Sporisorium reilianum	38.68	1.00e-13	71.20
IUUC-Ssc-116268	Sus scrofa	62.36	6.00e-135	474.00
IUUC-Tgu-116720	Taeniopygia guttata	58.89	3.00e-87	316.00
IUUC-Tru-117977	Takifugu rubripes	83.09	5.00e-164	570.00
IUUC-Tsy-119121	Tarsius syrichta	60.58	8.00e-76	277.00
IUUC-Tni-119904	Tetraodon nigroviridis	77.55	2.00e-153	535.00
IUUC-Tca-121718	Theobroma cacao	35.84	1.00e-54	206.00
IUUC-Tae-124364	Triticum aestivum	35.74	3.00e-52	198.00
IUUC-Tbe-127276	Tupaia belangeri	63.37	1.00e-110	392.00
IUUC-Uma-129505	Ustilago maydis	38.10	7.00e-11	62.00
IUUC-Vpa-130276	Vicugna pacos	67.93	1.00e-94	338.00
IUUC-Vvi-131377	Vitis vinifera	34.19	3.00e-54	207.00
IUUC-Xtr-132529	Xenopus tropicalis	63.66	1.00e-143	503.00
IUUC-Xma-134177	Xiphophorus maculatus	81.32	2.00e-165	574.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence