iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017979

Ensembl Protein ID

Bra000143.1-P

UniProt Accession

M4C7G5; M4C7G5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000143	Bra000143.1	Bra000143.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	30.1	189	230

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f  k   + +pC+H++h dC+  w         + +CP+Cr
   Q: 189  CAVCKENFelKSAAREMPCNHIYHPDCILPW------LAIRNSCPVCR 230
           ******9977444778***************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSSSGSYWCY SCSRFVWVSD SISCPDCDGG FLEHIQQSLD FTPPSSFLRH HRSPTRFPPP 60
SSSSSSMHTA ENSPPPPPPT VTRTRSNSSN RSPNPVIVLR GGSNPSESAF QMYYDDGTDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCTT CCGGATCGTA CTGGTGTTAC AGCTGCAGCC GCTTCGTCTG GGTCTCCGAC 60
TCCATCTCCT GCCCCGACTG CGACGGAGGC TTCCTCGAAC ACATCCAACA ATCCCTCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005732	Arabidopsis lyrata	73.16	1.00e-118	419.00
IUUC-Ath-007009	Arabidopsis thaliana	74.51	7.00e-122	429.00
IUUC-Bol-015584	Brassica oleracea	92.04	6.00e-140	489.00
IUUC-Mtr-057892	Medicago truncatula	51.03	1.00e-72	266.00
IUUC-Pop-100030	Populus trichocarpa	49.70	5.00e-66	244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence