iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095529

Ensembl Protein ID

PP1S48_240V6.1

UniProt Accession

A9S530; A9S530_PHYPA

Genbank Protein ID

EDQ73778.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544937

Gene Name

PHYPADRAFT_181363

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S48_240V6	PP1S48_240V6.1	PP1S48_240V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-24	84.8	50	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH++ v+ ++f ++  llvsGsdD  i vW++ 
   Q: 50   GHSGCVNTVSFnPTgELLVSGSDDQDIIVWNWA 82
           8***********778****************75 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MYRRLEPYRF GLGEHWRRQI GDVSPTAFTR RIGGCEDLVR RLVKYAELDG HSGCVNTVSF 60
NPTGELLVSG SDDQDIIVWN WANKTQVLSY ISGHENNVFQ ARVMPYCDDR IIVSCAADGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATCGTA GACTGGAACC ATATAGGTTT GGTTTAGGCG AGCATTGGCG TCGTCAGATT 60
GGGGATGTGA GTCCTACTGC ATTCACTCGA CGCATTGGAG GTTGTGAGGT ATGGAAACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_181363

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002578	Amborella trichopoda	53.88	2.00e-143	501.00
IUUC-Apl-003872	Anas platyrhynchos	39.11	9.00e-25	107.00
IUUC-Aly-005818	Arabidopsis lyrata	49.88	4.00e-120	424.00
IUUC-Cin-025683	Ciona intestinalis	41.99	6.00e-80	290.00
IUUC-Csv-026331	Ciona savignyi	44.44	9.00e-73	266.00
IUUC-Dme-032115	Drosophila melanogaster	40.20	7.00e-69	254.00
IUUC-Gma-044062	Glycine max	53.53	4.00e-118	417.00
IUUC-Mtr-058683	Medicago truncatula	51.95	1.00e-116	412.00
IUUC-Mac-064558	Musa acuminata	50.00	1.00e-134	472.00
IUUC-Oan-072748	Ornithorhynchus anatinus	27.00	7.00e-18	84.00
IUUC-Obr-076629	Oryza brachyantha	53.14	2.00e-129	455.00
IUUC-Oin-080061	Oryza indica	48.05	5.00e-110	390.00
IUUC-Pop-099784	Populus trichocarpa	50.73	7.00e-114	403.00
IUUC-Ppe-101712	Prunus persica	51.72	9.00e-124	436.00
IUUC-Sit-110823	Setaria italica	48.87	9.00e-131	459.00
IUUC-Stu-111978	Solanum tuberosum	56.24	3.00e-137	480.00
IUUC-Sbi-114455	Sorghum bicolor	53.09	4.00e-130	457.00
IUUC-Tca-121555	Theobroma cacao	52.91	2.00e-121	428.00
IUUC-Tur-126617	Triticum urartu	48.91	1.00e-110	392.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence