iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003151

Ensembl Protein ID

ERN14571

UniProt Accession

U5CN52; U5CN52_AMBTC

Genbank Protein ID

ERN14571.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392532

Gene Name

AMTR_s00038p00127830

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00038p00127830	ERN14571	ERN14571

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-15	57.6	231	266

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           H ++vtcla+ +d l+vsGs  g++ v D+ +g ++
   Q: 231  HHAPVTCLALtDDQLIVSGSSLGSVSVSDIVSGQDV 266
           7789******666**************999988765 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MEVGKSCLYS RRARSGGIHA LSSDLLCRIF GSLDHFDLAR SSVVCKFWYR TILNSNLWKH 60
LCYKQKQCPV DLSEVHTPNK SWSICLQELA VEQHITYLSA GFAEVSQWRG HSSGVNVCRM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTGG GAAAGAGCTG CCTATATAGC AGGAGAGCGC GCAGTGGAGG AATCCATGCG 60
CTTAGTAGTG ATCTTCTCTG CAGAATCTTC GGCTCTCTAG ACCACTTCGA TCTTGCTCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX
SM00320--WD40

KEGG

atr:18442832

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005690	Arabidopsis lyrata	46.06	8.00e-99	352.00
IUUC-Ath-006699	Arabidopsis thaliana	43.71	3.00e-91	327.00
IUUC-Bdi-014108	Brachypodium distachyon	45.18	7.00e-96	342.00
IUUC-Bol-015377	Brassica oleracea	46.92	6.00e-101	359.00
IUUC-Bra-016934	Brassica rapa	51.52	6.00e-87	313.00
IUUC-Gma-043394	Glycine max	47.95	1.00e-104	372.00
IUUC-Lpe-051613	Leersia perrieri	43.63	2.00e-85	308.00
IUUC-Mtr-057690	Medicago truncatula	47.39	3.00e-102	363.00
IUUC-Mac-064938	Musa acuminata	54.07	9.00e-87	311.00
IUUC-Oba-075418	Oryza barthii	47.67	5.00e-88	316.00
IUUC-Obr-076882	Oryza brachyantha	45.43	1.00e-94	338.00
IUUC-Ogl-077438	Oryza glaberrima	46.42	4.00e-96	343.00
IUUC-Ogu-078943	Oryza glumaepatula	46.91	2.00e-97	348.00
IUUC-Oin-079069	Oryza indica	46.67	5.00e-97	346.00
IUUC-Olo-080409	Oryza longistaminata	43.27	2.00e-82	298.00
IUUC-Oni-083056	Oryza nivara	46.42	4.00e-96	343.00
IUUC-Opu-084172	Oryza punctata	46.67	1.00e-97	348.00
IUUC-Oru-085030	Oryza rufipogon	46.67	6.00e-97	346.00
IUUC-Osa-085520	Oryza sativa	46.67	6.00e-97	346.00
IUUC-Ppa-095450	Physcomitrella patens	30.70	1.00e-38	153.00
IUUC-Pop-099796	Populus trichocarpa	52.15	4.00e-108	383.00
IUUC-Ppe-101252	Prunus persica	50.61	6.00e-102	363.00
IUUC-Smo-108718	Selaginella moellendorffii	32.44	8.00e-35	139.00
IUUC-Sit-109830	Setaria italica	43.98	3.00e-91	327.00
IUUC-Sly-111786	Solanum lycopersicum	50.12	2.00e-94	338.00
IUUC-Sbi-114102	Sorghum bicolor	46.68	8.00e-94	336.00
IUUC-Tca-121562	Theobroma cacao	53.55	3.00e-107	380.00
IUUC-Tae-123446	Triticum aestivum	46.89	2.00e-93	334.00
IUUC-Tur-126707	Triticum urartu	38.74	6.00e-66	243.00
IUUC-Vvi-131441	Vitis vinifera	50.71	6.00e-113	399.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence