iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005519

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_908763

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_600820.1	scaffold_600820.1	scaffold_600820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-07	32.5	317	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++++   ++ + lpC+H +h +C+  w       + + +CP+Cr
   Q: 317  CAVCKDEMniGNEAVQLPCNHKYHSECIVPW------LKVRNTCPVCR 358
           ******9988555999***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDLLHQRGEQ TEVTSPHDDI NNIHGDFDSE ATDESRSESC SVVIEGNCDM VIELGLDSGS 60
VVVENLGDSD IDVSNDFDEP DDDDFFVGRS DFGLEFRDIA SMGTDIRLIT VESGSDDDDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTCGATC TTCTCTAGCT CTGTCATGGA TCTGTTACAC CAGCGAGGTG AGCAGACTGA 60
GGTAACTTCT CCTCATGACG ATATTAATAA TATCCATGGT GATTTTGATA GCGAGGCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_908763

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006756	Arabidopsis thaliana	82.86	8.00e-155	538.00
IUUC-Bol-015556	Brassica oleracea	54.66	1.00e-80	292.00
IUUC-Bra-017981	Brassica rapa	54.43	5.00e-86	310.00
IUUC-Olu-087587	Ostreococcus lucimarinus	47.62	3.00e-11	62.80
IUUC-Pop-099600	Populus trichocarpa	52.56	6.00e-40	157.00
IUUC-Ppe-101286	Prunus persica	49.54	1.00e-43	170.00
IUUC-Tca-121330	Theobroma cacao	48.40	3.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence