iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017981

Ensembl Protein ID

Bra009323.1-P

UniProt Accession

M4CYM6; M4CYM6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra009323	Bra009323.1	Bra009323.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-07	32.8	312	353

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++++   ++ + lpC H +h++C+  w       +++ +CP+Cr
   Q: 312  CAVCKDEMdvGTEAVGLPCDHKYHTECIVPW------LKTRNTCPVCR 353
           ********66333777***************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDPSHQRVEQ SQVTLPRDDD NDGTVSRDVI VGNCDVVVEL GLGSGTVFIE NIDSDVVDVN 60
NLNGFDEPDD DDLELRGIAS MGSQIRLITI ESGSDDDDDH HENEREVWGI DLNDDDDVYD 120

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Nucleotide Sequence
(Fasta)

ATGGATCCGT CACACCAGCG CGTTGAGCAG TCTCAGGTAA CTCTTCCTCG CGACGATGAT 60
AACGATGGTA CGGTGTCTCG TGATGTGATA GTAGGAAACT GCGACGTGGT TGTTGAATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005519	Arabidopsis lyrata	51.23	2.00e-80	292.00
IUUC-Ath-006756	Arabidopsis thaliana	54.64	5.00e-86	310.00
IUUC-Bol-015556	Brassica oleracea	90.60	3.00e-138	484.00
IUUC-Gma-043673	Glycine max	39.34	4.00e-33	135.00
IUUC-Mtr-058184	Medicago truncatula	40.16	7.00e-39	154.00
IUUC-Ppe-101286	Prunus persica	41.15	1.00e-40	160.00
IUUC-Stu-112460	Solanum tuberosum	39.13	3.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence