iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093070

Ensembl Protein ID

ENSPSIP00000010729.1

UniProt Accession

K7FRR9; K7FRR9_PELSI

Genbank Protein ID

ENSPSIP00000010729

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01080179

Gene Name

UTP4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000009673.1	ENSPSIT00000010783.1	ENSPSIP00000010729.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-09	38.2	194	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           ++ v+++af  d+ +vs+   g+++ WD ++g+ll
   Q: 194  ECVVWGVAFlADGSIVSSDSAGKVQFWDSDKGTLL 228
           6789******7799***9999*******9988876 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

XEFQGHRARF FAYLPVGICC VAPCPRSARL ALARTDGALE VYNFAANYFQ EKHIPGHETR 60
STEALCWAAG DRLFGAGLSG DICEYDLEKL RVKYSLDGFG GPIWSMAADP SGTQLAVGCE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNGG 60
GAGTTCCAGG GGCACCGGGC GCGGTTCTTC GCCTACCTGC CGGTGGGGAT CTGCTGTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005694--C:chromosome
GO:0001650--C:fibrillar center
GO:0034455--C:t-UTP complex
GO:0003723--F:RNA binding
GO:0030490--P:maturation of SSU-rRNA
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	25.12	3.00e-41	163.00
IUUC-Aml-001310	Ailuropoda melanoleuca	61.95	0.00e+00	894.00
IUUC-Atr-003076	Amborella trichopoda	23.97	2.00e-32	134.00
IUUC-Apl-003367	Anas platyrhynchos	70.29	8.00e-65	238.00
IUUC-Aca-004429	Anolis carolinensis	68.54	2.00e-156	544.00
IUUC-Aly-006271	Arabidopsis lyrata	24.16	3.00e-38	153.00
IUUC-Ath-007331	Arabidopsis thaliana	23.96	4.00e-37	149.00
IUUC-Ago-007843	Ashbya gossypii	23.35	7.00e-40	158.00
IUUC-Acl-008229	Aspergillus clavatus	28.23	2.00e-43	171.00
IUUC-Afl-008438	Aspergillus flavus	28.01	6.00e-41	162.00
IUUC-Afu-008910	Aspergillus fumigatus	28.36	1.00e-41	165.00
IUUC-Ani-009321	Aspergillus nidulans	29.45	5.00e-41	162.00
IUUC-Ang-009592	Aspergillus niger	28.21	6.00e-44	172.00
IUUC-Aor-010220	Aspergillus oryzae	27.82	4.00e-41	162.00
IUUC-Ate-010317	Aspergillus terreus	28.28	1.00e-43	171.00
IUUC-Ame-010957	Astyanax mexicanus	53.33	0.00e+00	751.00
IUUC-Bgr-012057	Blumeria graminis	24.62	5.00e-34	139.00
IUUC-Bta-012473	Bos taurus	62.15	0.00e+00	880.00
IUUC-Bdi-014203	Brachypodium distachyon	25.03	2.00e-49	190.00
IUUC-Bol-016163	Brassica oleracea	25.30	3.00e-42	166.00
IUUC-Bra-017482	Brassica rapa	25.24	5.00e-43	169.00
IUUC-Cja-019942	Callithrix jacchus	61.52	0.00e+00	884.00
IUUC-Cfa-020549	Canis familiaris	64.12	0.00e+00	662.00
IUUC-Cpo-022088	Cavia porcellus	62.24	0.00e+00	876.00
IUUC-Csa-023773	Chlorocebus sabaeus	62.83	0.00e+00	895.00
IUUC-Cho-024302	Choloepus hoffmanni	62.17	0.00e+00	727.00
IUUC-Cin-025384	Ciona intestinalis	33.04	2.00e-107	383.00
IUUC-Dre-027460	Danio rerio	52.40	0.00e+00	738.00
IUUC-Dno-029594	Dasypus novemcinctus	62.09	0.00e+00	877.00
IUUC-Dor-030564	Dipodomys ordii	57.01	2.00e-143	502.00
IUUC-Dse-031179	Dothistroma septosporum	27.26	5.00e-35	142.00
IUUC-Dme-031603	Drosophila melanogaster	24.79	7.00e-50	191.00
IUUC-Ete-032655	Echinops telfairi	59.24	0.00e+00	826.00
IUUC-Eca-033838	Equus caballus	62.68	0.00e+00	897.00
IUUC-Eeu-034548	Erinaceus europaeus	59.62	0.00e+00	848.00
IUUC-Fca-035715	Felis catus	62.39	0.00e+00	896.00
IUUC-Fal-037394	Ficedula albicollis	67.37	0.00e+00	842.00
IUUC-Gmo-039235	Gadus morhua	47.23	0.00e+00	651.00
IUUC-Ggr-040043	Gaeumannomyces graminis	28.54	1.00e-30	128.00
IUUC-Gga-041172	Gallus gallus	67.60	0.00e+00	933.00
IUUC-Gac-042466	Gasterosteus aculeatus	54.85	0.00e+00	755.00
IUUC-Gma-044222	Glycine max	22.51	9.00e-33	135.00
IUUC-Ggo-045416	Gorilla gorilla	59.80	0.00e+00	839.00
IUUC-Hsa-046115	Homo sapiens	62.57	0.00e+00	870.00
IUUC-Hvu-047229	Hordeum vulgare	25.19	8.00e-39	155.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	62.24	0.00e+00	894.00
IUUC-Kpa-049370	Komagataella pastoris	21.94	4.00e-31	129.00
IUUC-Lch-050153	Latimeria chalumnae	57.02	0.00e+00	804.00
IUUC-Lpe-051220	Leersia perrieri	24.69	2.00e-44	173.00
IUUC-Loc-052617	Lepisosteus oculatus	55.41	0.00e+00	791.00
IUUC-Laf-053613	Loxodonta africana	62.39	0.00e+00	893.00
IUUC-Mcc-055707	Macaca mulatta	62.39	0.00e+00	867.00
IUUC-Meu-056800	Macropus eugenii	57.27	0.00e+00	656.00
IUUC-Mor-057245	Magnaporthe oryzae	27.48	5.00e-29	122.00
IUUC-Mpo-057446	Magnaporthe poae	29.22	1.00e-31	131.00
IUUC-Mtr-058748	Medicago truncatula	23.85	7.00e-39	155.00
IUUC-Mga-060018	Meleagris gallopavo	66.97	0.00e+00	889.00
IUUC-Mmr-061115	Microcebus murinus	62.39	0.00e+00	879.00
IUUC-Mdo-062235	Monodelphis domestica	65.89	0.00e+00	951.00
IUUC-Mmu-063158	Mus musculus	59.48	0.00e+00	860.00
IUUC-Mac-065380	Musa acuminata	23.97	8.00e-46	178.00
IUUC-Mpu-065805	Mustela putorius furo	62.39	0.00e+00	895.00
IUUC-Mlu-066951	Myotis lucifugus	61.95	0.00e+00	883.00
IUUC-Nfi-068295	Neosartorya fischeri	29.00	2.00e-41	164.00
IUUC-Ncr-068880	Neurospora crassa	25.54	1.00e-34	141.00
IUUC-Nle-069657	Nomascus leucogenys	62.24	0.00e+00	897.00
IUUC-Opr-070250	Ochotona princeps	61.66	0.00e+00	875.00
IUUC-Ont-072642	Oreochromis niloticus	51.09	0.00e+00	702.00
IUUC-Ocu-074741	Oryctolagus cuniculus	63.12	0.00e+00	897.00
IUUC-Oba-074974	Oryza barthii	25.37	7.00e-37	149.00
IUUC-Obr-076586	Oryza brachyantha	26.05	2.00e-37	150.00
IUUC-Ogl-077782	Oryza glaberrima	25.80	1.00e-39	158.00
IUUC-Ogu-078333	Oryza glumaepatula	23.71	1.00e-40	161.00
IUUC-Oin-079852	Oryza indica	24.88	2.00e-47	183.00
IUUC-Olo-080370	Oryza longistaminata	25.27	3.00e-34	139.00
IUUC-Ome-081442	Oryza meridionalis	24.61	4.00e-46	179.00
IUUC-Oni-082341	Oryza nivara	23.71	7.00e-41	162.00
IUUC-Opu-083824	Oryza punctata	25.19	4.00e-37	149.00
IUUC-Oru-084827	Oryza rufipogon	24.55	2.00e-44	174.00
IUUC-Osa-085742	Oryza sativa	24.75	4.00e-47	182.00
IUUC-Ola-086466	Oryzias latipes	52.99	0.00e+00	722.00
IUUC-Olu-087761	Ostreococcus lucimarinus	24.69	2.00e-43	170.00
IUUC-Oga-088721	Otolemur garnettii	60.37	0.00e+00	833.00
IUUC-Oar-089532	Ovis aries	62.68	0.00e+00	892.00
IUUC-Ptr-091604	Pan troglodytes	62.54	0.00e+00	895.00
IUUC-Pan-092060	Papio anubis	66.58	4.00e-160	556.00
IUUC-Pma-094201	Petromyzon marinus	54.03	7.00e-144	503.00
IUUC-Pno-094924	Phaeosphaeria nodorum	29.58	3.00e-11	63.50
IUUC-Ppa-095599	Physcomitrella patens	28.69	6.00e-34	139.00
IUUC-Pfo-097207	Poecilia formosa	52.24	0.00e+00	707.00
IUUC-Pab-097746	Pongo abelii	62.39	0.00e+00	890.00
IUUC-Pop-099669	Populus trichocarpa	25.12	3.00e-49	189.00
IUUC-Pca-100562	Procavia capensis	56.17	1.00e-178	619.00
IUUC-Ppe-101747	Prunus persica	23.98	2.00e-43	170.00
IUUC-Pva-103054	Pteropus vampyrus	62.10	0.00e+00	895.00
IUUC-Pte-104064	Pyrenophora teres	27.56	8.00e-32	132.00
IUUC-Pyt-104595	Pyrenophora triticirepentis	27.17	3.00e-33	137.00
IUUC-Rno-105155	Rattus norvegicus	60.79	0.00e+00	870.00
IUUC-Sce-106369	Saccharomyces cerevisiae	23.85	2.00e-43	170.00
IUUC-Sha-107149	Sarcophilus harrisii	66.33	0.00e+00	948.00
IUUC-Sja-107777	Schizosaccharomyces japonicus	25.96	2.00e-55	209.00
IUUC-Spo-108372	Schizosaccharomyces pombe	25.75	1.00e-59	224.00
IUUC-Ssl-108650	Sclerotinia sclerotiorum	25.44	8.00e-38	152.00
IUUC-Smo-108851	Selaginella moellendorffii	25.91	9.00e-51	194.00
IUUC-Sit-110454	Setaria italica	24.46	3.00e-49	190.00
IUUC-Sly-111875	Solanum lycopersicum	23.97	1.00e-42	167.00
IUUC-Stu-112275	Solanum tuberosum	24.42	2.00e-38	154.00
IUUC-Sar-113254	Sorex araneus	51.81	3.00e-120	425.00
IUUC-Sbi-114624	Sorghum bicolor	26.36	2.00e-44	173.00
IUUC-Sre-114985	Sporisorium reilianum	23.62	2.00e-14	74.30
IUUC-Tgu-117407	Taeniopygia guttata	67.99	2.00e-153	535.00
IUUC-Tru-118733	Takifugu rubripes	53.01	4.00e-142	498.00
IUUC-Tsy-119213	Tarsius syrichta	56.54	0.00e+00	701.00
IUUC-Tni-120894	Tetraodon nigroviridis	48.49	1.00e-94	339.00
IUUC-Tca-121606	Theobroma cacao	25.26	3.00e-32	133.00
IUUC-Tre-121958	Trichoderma reesei	26.22	9.00e-39	155.00
IUUC-Tvi-122290	Trichoderma virens	27.09	3.00e-40	160.00
IUUC-Tae-125441	Triticum aestivum	24.70	3.00e-40	159.00
IUUC-Tme-126995	Tuber melanosporum	28.47	8.00e-38	152.00
IUUC-Tbe-127605	Tupaia belangeri	52.30	3.00e-45	176.00
IUUC-Ttr-128720	Tursiops truncatus	62.10	0.00e+00	879.00
IUUC-Uma-129564	Ustilago maydis	26.29	1.00e-16	82.00
IUUC-Vpa-130412	Vicugna pacos	64.75	5.00e-99	355.00
IUUC-Vvi-131256	Vitis vinifera	26.48	1.00e-32	134.00
IUUC-Xtr-131828	Xenopus tropicalis	55.72	0.00e+00	771.00
IUUC-Xma-133394	Xiphophorus maculatus	52.29	0.00e+00	712.00
IUUC-Yli-134565	Yarrowia lipolytica	31.96	3.00e-38	153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence