iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113786

UUCD1 version

UUC-SoB-00075

Ensembl Protein ID

Sb09g020070.1

UniProt Accession

A0A1B6P891; A0A1B6P891_SORBI

Genbank Protein ID

KXG21980.1; KXG21981.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768; CM000768

Gene Name

SORBI_009G134500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g020070	Sb09g020070.1	Sb09g020070.1
Sb09g020070	Sb09g020070.2	Sb09g020070.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-17	62.1	193	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf...sdtllvsGsdDgtikvWD 29
           t++v+ +af   +++l+ sGsdD  +kvWD
   Q: 193  TSDVNTVAFadeTGHLIYSGSDDTLCKVWD 222
           689*******7544999************* PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGYGMSRLED EYYEPEGQNT DGSGSVQVNN EFAELHNDIF HMTRMRSRLT ESYKSMGTNR 60
GIISTAKLLS QREIDCSGKR MFSSGDRAFV LGRYVPMNGP QLLDRMDSRA YVSQFSADGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGAGCGGCC CTGCATCTTT GTTATCCCGT CCGGCCGGGC GACTCCAGTG ACCAGTTCTT 60
CCCCCTGTCT CTCTCGCTCT CGCGTGGTTC TCCCGTGCCC CCGGCGTGAG CGCGCTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000492	Aegilops tauschii	54.49	2.00e-130	457.00
IUUC-Atr-002856	Amborella trichopoda	45.22	1.00e-93	336.00
IUUC-Aly-006571	Arabidopsis lyrata	48.25	4.00e-115	407.00
IUUC-Ath-007313	Arabidopsis thaliana	48.25	4.00e-114	404.00
IUUC-Bdi-014379	Brachypodium distachyon	61.99	2.00e-166	577.00
IUUC-Gma-043167	Glycine max	51.63	3.00e-126	444.00
IUUC-Lch-050257	Latimeria chalumnae	29.50	2.00e-40	159.00
IUUC-Lpe-050967	Leersia perrieri	55.86	1.00e-139	488.00
IUUC-Mtr-058464	Medicago truncatula	49.04	2.00e-122	431.00
IUUC-Mac-064473	Musa acuminata	50.44	1.00e-120	425.00
IUUC-Ncr-068715	Neurospora crassa	35.08	1.00e-56	213.00
IUUC-Oba-075609	Oryza barthii	61.64	2.00e-148	518.00
IUUC-Obr-076243	Oryza brachyantha	61.90	1.00e-147	515.00
IUUC-Ogl-077467	Oryza glaberrima	60.99	1.00e-147	515.00
IUUC-Oin-079588	Oryza indica	61.85	6.00e-149	519.00
IUUC-Olo-080912	Oryza longistaminata	54.09	7.00e-128	449.00
IUUC-Ome-081874	Oryza meridionalis	61.85	7.00e-149	519.00
IUUC-Oni-082655	Oryza nivara	61.64	2.00e-148	518.00
IUUC-Opu-084069	Oryza punctata	62.07	4.00e-145	506.00
IUUC-Oru-085209	Oryza rufipogon	61.64	2.00e-148	518.00
IUUC-Osa-086287	Oryza sativa	61.42	2.00e-147	514.00
IUUC-Ppa-095260	Physcomitrella patens	48.96	3.00e-111	394.00
IUUC-Pab-098091	Pongo abelii	39.83	1.00e-69	256.00
IUUC-Pop-099095	Populus trichocarpa	49.01	2.00e-120	424.00
IUUC-Ppe-102075	Prunus persica	50.66	8.00e-123	432.00
IUUC-Ptt-103861	Puccinia triticina	32.50	3.00e-33	135.00
IUUC-Smo-109115	Selaginella moellendorffii	45.61	3.00e-96	344.00
IUUC-Sit-110726	Setaria italica	74.84	0.00e+00	688.00
IUUC-Sly-110856	Solanum lycopersicum	50.33	1.00e-123	436.00
IUUC-Stu-112589	Solanum tuberosum	49.54	3.00e-108	384.00
IUUC-Tae-124509	Triticum aestivum	63.46	3.00e-165	573.00
IUUC-Tur-126714	Triticum urartu	59.30	7.00e-149	519.00
IUUC-Tme-127050	Tuber melanosporum	34.38	5.00e-60	224.00
IUUC-Vvi-131266	Vitis vinifera	52.31	3.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence