iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099474

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTR_0014s06500g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s06500	POPTR_0014s06500.1	POPTR_0014s06500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-15	56.7	84	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH dsvt+l+f  d + l++++ Dg+++v+ l++
   Q: 84   GHGDSVTGLCFsYDgRSLATACADGVVRVFKLDD 117
           8**********955599*************9977 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDQVLPIALI SVLLGTAFAL IFFKNYFLKR KSEIGSIAKP EIHPDPLRKP PKPTHQSKKS 60
HSHASSDKDH NKKHHPLDLN TLKGHGDSVT GLCFSYDGRS LATACADGVV RVFKLDDASS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTCCATTC TCTAATTTCT ACACTGGAGA GTGAAGAAAC AGTGTGAGCG AAAGACGCAA 60
CCAGGCGACA CGTATAACCC CCCCCCCCGG GGGCCATTTC TCATCATCAT CGAGCTCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0014s06500g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005761	Arabidopsis lyrata	70.96	4.00e-180	623.00
IUUC-Ath-007476	Arabidopsis thaliana	70.23	0.00e+00	635.00
IUUC-Bol-015192	Brassica oleracea	68.89	4.00e-179	620.00
IUUC-Bra-017078	Brassica rapa	69.35	0.00e+00	625.00
IUUC-Cja-018909	Callithrix jacchus	30.66	3.00e-37	149.00
IUUC-Gma-044233	Glycine max	74.02	0.00e+00	627.00
IUUC-Meu-056003	Macropus eugenii	29.61	1.00e-36	146.00
IUUC-Mdo-063002	Monodelphis domestica	29.45	3.00e-31	128.00
IUUC-Ocu-074493	Oryctolagus cuniculus	30.98	1.00e-36	146.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence