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Tag Content
UUCD2 ID IUUC-Aly-005397
UUCD1 version UUC-ArL-00964
Ensembl Protein ID scaffold_701416.1
UniProt Accession D7MDC4; D7MDC4_ARALL
Genbank Protein ID EFH45760.1
Protein Name RING-type E3 ubiquitin transferase
Genbank Nucleotide ID GL348719
Gene Name ARALYDRAFT_913674
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_701416.1 scaffold_701416.1 scaffold_701416.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 9.00e-19 68.0 42 114
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
    +p eflCpI++ lM+dPvv++sG+t++r s++ + + g ++ + + ++++Pnl+++++i +wc++n+
   Q: 42 TPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLGFAPKLHDGPQPDLSTVIPNLAMKSTILSWCDRNKM 114
    699*************************************999999999*********************985 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MNPTASQNSS SSTPSSELDS LLLSSLFQIK SPRIGLHVHR RTPTEFLCPI TGFLMSDPVV 60
VASGQTFERI SVQVCRNLGF APKLHDGPQP DLSTVIPNLA MKSTILSWCD RNKMEHPRPP 120
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Protein Fasta Sequence



>IUUC-Aly-005397|E3,U-box|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTCATTAGAT CCCGAAACCC ATGAATCCAA CTGCATCCCA AAATTCTTCA TCATCAACGC 60
CATCATCGGA ACTTGACTCT CTTCTTCTTT CCTCCTTGTT CCAAATCAAG TCCCCACGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-005397|E3,U-box|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity

KEGG aly:ARALYDRAFT_913674
Created Date 25-Jun-2017

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