iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049246

Ensembl Protein ID

CAY69989

UniProt Accession

C4R3F4; C4R3F4_KOMPG

Genbank Protein ID

CAY69989.1

Protein Name

Golgi-localized RING-finger ubiquitin ligase (E3), involved in ubiquitinating and sorting membrane p

Genbank Nucleotide ID

FN392321

Gene Name

PAS_chr3_0061

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr3_0061	CAY69989	CAY69989

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-10	38.6	700	765

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..........................kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC++++                          ++ ++v+pC H+fh +Cl+ w       + + +CP+Cr
   Q: 700  CAICMSELkvpvvsrkglgneestehsnipgilsRRVYMVTPCRHLFHSECLESW------MQYKLQCPVCR 765
           ********66666666666655555555555554444668***************......9999******8 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MNVDRAQIIF FLILFFLLLG PNGGNDLSNE NRNKVISFKQ FKEDIQHSNE VLRNSTWEEG 60
YGDLAGFSVS YQDALDGLNR SSPINDNFTE DQKYSILPNE ISELAMDIWS AEEGTKKIRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATGTTG ACAGGGCTCA GATAATATTT TTTCTGATCC TCTTCTTCCT ATTACTAGGT 60
CCAAATGGGG GTAATGATTT ATCCAATGAG AACAGGAATA AAGTTATTTC TTTCAAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

ppa:PAS_chr3_0061

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000147	Aegilops tauschii	31.34	1.00e-27	115.00
IUUC-Aml-002056	Ailuropoda melanoleuca	48.65	5.00e-07	46.20
IUUC-Atr-003038	Amborella trichopoda	34.16	2.00e-27	114.00
IUUC-Aly-006241	Arabidopsis lyrata	30.81	1.00e-26	112.00
IUUC-Ath-007133	Arabidopsis thaliana	31.31	1.00e-26	112.00
IUUC-Ago-007897	Ashbya gossypii	31.88	2.00e-106	378.00
IUUC-Acl-008354	Aspergillus clavatus	30.95	1.00e-78	285.00
IUUC-Afl-008715	Aspergillus flavus	31.91	4.00e-74	270.00
IUUC-Afu-008993	Aspergillus fumigatus	31.69	8.00e-83	299.00
IUUC-Ani-009159	Aspergillus nidulans	29.74	9.00e-72	262.00
IUUC-Ang-009736	Aspergillus niger	30.53	5.00e-73	267.00
IUUC-Aor-010205	Aspergillus oryzae	31.91	4.00e-74	270.00
IUUC-Ate-010380	Aspergillus terreus	32.03	1.00e-76	278.00
IUUC-Bgr-012261	Blumeria graminis	36.02	2.00e-42	165.00
IUUC-Bci-013822	Botrytis cinerea	37.29	1.00e-43	169.00
IUUC-Bdi-014178	Brachypodium distachyon	30.85	5.00e-28	117.00
IUUC-Bol-016426	Brassica oleracea	29.80	3.00e-26	111.00
IUUC-Bra-017704	Brassica rapa	29.80	4.00e-26	110.00
IUUC-Cfa-020880	Canis familiaris	55.17	9.00e-08	47.40
IUUC-Cre-022642	Chlamydomonas reinhardtii	26.98	7.00e-10	55.50
IUUC-Csa-023279	Chlorocebus sabaeus	48.65	6.00e-07	46.20
IUUC-Cgl-026705	Colletotrichum gloeosporioides	46.89	5.00e-52	197.00
IUUC-Cne-027078	Cryptococcus neoformans	33.06	1.00e-21	96.30
IUUC-Cme-027308	Cyanidioschyzon merolae	31.19	6.00e-22	97.40
IUUC-Dno-029561	Dasypus novemcinctus	48.65	1.00e-06	45.10
IUUC-Dor-030499	Dipodomys ordii	51.72	5.00e-07	44.70
IUUC-Dse-031227	Dothistroma septosporum	41.87	9.00e-53	199.00
IUUC-Ete-032501	Echinops telfairi	51.72	3.00e-07	45.10
IUUC-Eca-034245	Equus caballus	48.65	4.00e-07	46.60
IUUC-Eeu-034911	Erinaceus europaeus	48.65	5.00e-07	46.20
IUUC-Fox-037716	Fusarium oxysporum	40.25	3.00e-46	177.00
IUUC-Fso-038434	Fusarium solani	41.86	1.00e-28	119.00
IUUC-Gmo-039623	Gadus morhua	41.67	3.00e-07	47.00
IUUC-Ggr-039796	Gaeumannomyces graminis	41.48	3.00e-46	178.00
IUUC-Gma-042652	Glycine max	31.12	2.00e-26	112.00
IUUC-Ggo-044851	Gorilla gorilla	48.65	6.00e-07	46.20
IUUC-Hsa-046657	Homo sapiens	48.65	6.00e-07	46.20
IUUC-Hvu-047407	Hordeum vulgare	29.59	9.00e-24	102.00
IUUC-Lpe-050804	Leersia perrieri	30.85	1.00e-26	112.00
IUUC-Loc-052517	Lepisosteus oculatus	30.14	8.00e-08	47.40
IUUC-Lma-052994	Leptosphaeria maculans	38.94	1.00e-45	176.00
IUUC-Mcc-055582	Macaca mulatta	48.65	5.00e-07	46.20
IUUC-Mor-057007	Magnaporthe oryzae	37.45	1.00e-48	186.00
IUUC-Mpo-057296	Magnaporthe poae	40.97	1.00e-48	186.00
IUUC-Mtr-057662	Medicago truncatula	32.65	2.00e-26	111.00
IUUC-Mvi-060396	Microbotryum violaceum	34.55	1.00e-26	113.00
IUUC-Mmr-061195	Microcebus murinus	51.72	4.00e-07	45.10
IUUC-Mac-065213	Musa acuminata	34.83	2.00e-21	95.10
IUUC-Nfi-068252	Neosartorya fischeri	31.70	1.00e-82	299.00
IUUC-Ncr-068860	Neurospora crassa	42.74	7.00e-27	114.00
IUUC-Nle-069662	Nomascus leucogenys	48.65	5.00e-07	46.20
IUUC-Oba-075543	Oryza barthii	29.29	2.00e-14	71.20
IUUC-Obr-076427	Oryza brachyantha	31.34	3.00e-27	114.00
IUUC-Ogl-077281	Oryza glaberrima	30.85	5.00e-27	113.00
IUUC-Ogu-078135	Oryza glumaepatula	28.57	5.00e-14	70.50
IUUC-Oin-079565	Oryza indica	30.85	5.00e-27	113.00
IUUC-Olo-080765	Oryza longistaminata	30.85	1.00e-26	112.00
IUUC-Ome-081704	Oryza meridionalis	26.79	2.00e-14	71.60
IUUC-Oni-082520	Oryza nivara	35.71	2.00e-14	70.90
IUUC-Opu-083443	Oryza punctata	27.86	5.00e-14	70.10
IUUC-Oru-085261	Oryza rufipogon	28.57	5.00e-14	70.10
IUUC-Osa-085906	Oryza sativa	37.50	6.00e-09	52.00
IUUC-Olu-087584	Ostreococcus lucimarinus	25.28	2.00e-26	110.00
IUUC-Oga-088763	Otolemur garnettii	47.37	7.00e-07	45.80
IUUC-Ptr-091507	Pan troglodytes	48.65	6.00e-07	46.20
IUUC-Pan-091920	Papio anubis	48.65	5.00e-07	46.20
IUUC-Pno-095138	Phaeosphaeria nodorum	41.63	9.00e-50	191.00
IUUC-Ppa-095582	Physcomitrella patens	31.25	1.00e-26	112.00
IUUC-Pab-098149	Pongo abelii	48.65	4.00e-07	46.60
IUUC-Pop-098898	Populus trichocarpa	32.34	6.00e-28	116.00
IUUC-Pca-100492	Procavia capensis	51.72	5.00e-07	45.10
IUUC-Ppe-102081	Prunus persica	32.83	2.00e-27	114.00
IUUC-Pva-102641	Pteropus vampyrus	51.72	5.00e-07	44.70
IUUC-Pgr-103658	Puccinia graminis	28.85	1.00e-22	99.80
IUUC-Ptt-103835	Puccinia triticina	28.14	8.00e-16	77.00
IUUC-Pte-104066	Pyrenophora teres	33.01	8.00e-24	104.00
IUUC-Pyt-104574	Pyrenophora triticirepentis	38.36	3.00e-42	164.00
IUUC-Sce-106438	Saccharomyces cerevisiae	33.62	2.00e-118	417.00
IUUC-Sja-107916	Schizosaccharomyces japonicus	25.34	7.00e-24	102.00
IUUC-Spo-108066	Schizosaccharomyces pombe	31.68	1.00e-59	222.00
IUUC-Ssl-108517	Sclerotinia sclerotiorum	24.66	8.00e-40	156.00
IUUC-Smo-109376	Selaginella moellendorffii	26.85	6.00e-28	116.00
IUUC-Sit-109719	Setaria italica	30.85	4.00e-27	114.00
IUUC-Sly-111887	Solanum lycopersicum	32.84	2.00e-26	111.00
IUUC-Stu-112706	Solanum tuberosum	32.99	8.00e-27	112.00
IUUC-Sbi-114347	Sorghum bicolor	30.35	1.00e-26	112.00
IUUC-Sre-114925	Sporisorium reilianum	29.80	2.00e-16	79.30
IUUC-Tca-121160	Theobroma cacao	32.34	4.00e-20	90.90
IUUC-Tre-121878	Trichoderma reesei	39.41	7.00e-50	190.00
IUUC-Tvi-122299	Trichoderma virens	39.92	9.00e-51	193.00
IUUC-Tae-125507	Triticum aestivum	31.34	7.00e-28	116.00
IUUC-Tur-126740	Triticum urartu	27.07	3.00e-19	87.80
IUUC-Tme-126915	Tuber melanosporum	34.48	3.00e-85	307.00
IUUC-Ttr-129081	Tursiops truncatus	51.72	5.00e-07	45.10
IUUC-Uma-129430	Ustilago maydis	29.79	2.00e-13	68.90
IUUC-Vda-129918	Verticillium dahliae	45.19	6.00e-52	196.00
IUUC-Vpa-130305	Vicugna pacos	51.72	3.00e-07	45.10
IUUC-Vvi-131478	Vitis vinifera	31.84	5.00e-26	110.00
IUUC-Yli-134449	Yarrowia lipolytica	31.27	2.00e-96	345.00
IUUC-Zma-135016	Zea mays	29.20	1.00e-13	68.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence