iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-07	31.3	159	207

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv.........lp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e ++d  l+         +p C H fh++C+ kw        ++ +CPlCr
   Q: 159  CSICFEKLSD-SLSetyhnsiiqMPkCLHSFHQKCIFKW------IGRQNSCPLCR 207
           ********66.332222222222558*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

METETLRLQV ATRMSKLPSN LGFTSAVQIE LHEVIHEMLE DVTGTTPVVA SLSPISHVLL 60
KPRSFLPEQL SRLLRRQLHR DTSICESLAE KISSLRFSRA NYTLYQRPFL MTVKVRVIKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACCG AAACTTTGAG ACTACAAGTG GCTACGAGGA TGTCGAAGCT ACCTTCGAAT 60
CTAGGGTTCA CAAGTGCTGT CCAAATCGAA CTACACGAAG TAATCCATGA GATGCTCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G37280

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005528	Arabidopsis lyrata	80.82	8.00e-88	315.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence