iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f+++ ++l+    C Hvfh++C+ +w         + +CP+Cr
   Q: 114  CAICLLEFEEEHILLRllttCYHVFHQECIDQW------LESNKTCPVCR 157
           ********998555555556*************......999*******8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MPIAKPINQN TTVPYPPQHY SKPPLVIILT VILLVVFFIG FFAIYFCKCF YHTLTEAWNH 60
HYHNGLPENQ IQAQQEPVQP PVNPGLEPHI IQSYPLFPFS SVKDLREDKY GLECAICLLE 120

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Nucleotide Sequence
(Fasta)

AACAAAACGT TTTTTCTAAA TTAAGTAAAC AAATCCTAAA CACAAACACT CTCACATTGT 60
CACCATACAC AAAAATTTCA AAACACTTAA GAAAAAACAA ATTTAAACAG AAGAATATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G46650

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005574	Arabidopsis lyrata	95.50	9.00e-145	504.00
IUUC-Bol-015402	Brassica oleracea	80.76	4.00e-124	436.00
IUUC-Bra-017116	Brassica rapa	81.10	2.00e-123	434.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence