iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e++   k+ +  lpC H +h +C+  w         + +CP+Cr
   Q: 372  CAVCKEEMivgKE-VAELPCRHKYHSECIVPW------LGIRNTCPVCR 413
           ********99555.999***************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAEMSYLQID DANDAVFNHY RHQRRLHDHL RDQSFSQILY PLPHWIQSDD GDLYISETDF 60
SSGDVSVSDL VFTTDDGLDL LDRRSFVMDL FHQRVEQSQV TPLDNDGIDD FENYEMREDN 120

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Nucleotide Sequence
(Fasta)

TTGACGCAAA TTTAAAAAAA CAAATAGAAA ATTGTTCCTC TCAAATAAAA AAGAGAAAGA 60
GATCCACCGG AAAATATGGC GGAGATGTCT TACCTTCAGA TCGACGATGC TAACGATGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G60820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006572	Arabidopsis lyrata	88.36	7.00e-161	559.00
IUUC-Bol-016164	Brassica oleracea	63.28	6.00e-106	376.00
IUUC-Bra-017179	Brassica rapa	67.52	6.00e-99	353.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence