iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006563

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme 29

Genbank Nucleotide ID

GL348720

Gene Name

UBC3; ARALYDRAFT_919520

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_802920.1	scaffold_802920.1	scaffold_802920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.00e-52	176.3	8	142

Active Site

Position(s)	Description	Evidence
88	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekW 92
           Rl+ ++k+l+kdpp gis  p+d+ ++++w+++i+Gp+dtp++gg+Fkl+++f+edYP kPP v+f++++fhPn+y++G++Cl+il+  ++W
   Q: 8    RLMWDFKRLQKDPPVGISGAPQDN-NIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQ--NQW 96
           8999*******************9.9************************************************************9..*** PP
   S: 93   spalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           sp ++v+ vl+siqsll++pnp+sp+n+eaa+l+++n++ey++kv+
   Q: 97   SPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVS 142
           *******************************************996 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTTPARKRLM WDFKRLQKDP PVGISGAPQD NNIMHWNAVI FGPDDTPWDG GTFKLTLQFT 60
EDYPNKPPIV RFVSRMFHPN IYADGSICLD ILQNQWSPIY DVAAVLTSIQ SLLCDPNPDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAAAGGTT TCCAACAACA ATGACAACTC CAGCAAGAAA GAGACTGATG TGGGATTTCA 60
AGAGACTGCA GAAAGATCCT CCTGTGGGAA TTAGTGGAGC TCCTCAAGAT AACAATATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_919520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006896	Arabidopsis thaliana	96.67	2.00e-85	306.00
IUUC-Bol-015664	Brassica oleracea	92.67	1.00e-83	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence