iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111093

Ensembl Protein ID

Solyc11g005550.1.1

UniProt Accession

K4D4G8; K4D4G8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g005550.1	Solyc11g005550.1.1	Solyc11g005550.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-32	111.2	16	54
UBD/Beta-Prp	1.10e-51	176.5	9	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v + +f s+  + +s++ D ti++W++++gv +k
   Q: 16   GHAGAVLAARFnSNgEYALSCGKDRTIRLWNPHRGVHIK 54
           8**********9777******************999876 PP

UBD/Beta-Prp

   S: 127  qcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
           q+++ +l+gh g+v  ++++++g +  s+++Drt+rlW+  +g  ++t +  h + v+ + ++++   l s++ d++v +wd++tg+++r+
   Q: 9    QKVH-VLEGHAGAVLAARFNSNGEYALSCGKDRTIRLWNPHRGVHIKTYKA-HGREVRDVHVTQDNSKLCSCGGDRQVFYWDVSTGHVIRK 97
           6778.9*******************************************98.*************************************** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
           ++gh++ v+ v+f +    +vs++ D+s+r+Wd++s+ +
   Q: 98   FRGHDSEVNAVKFNEYASVVVSAGYDKSLRVWDCKSRST 136
           **********************************99865 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MTAVQLPKQK VHVLEGHAGA VLAARFNSNG EYALSCGKDR TIRLWNPHRG VHIKTYKAHG 60
REVRDVHVTQ DNSKLCSCGG DRQVFYWDVS TGHVIRKFRG HDSEVNAVKF NEYASVVVSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCGCTG TACAACTGCC GAAGCAGAAG GTACATGTGC TGGAAGGACA CGCCGGAGCT 60
GTTTTGGCGG CGAGGTTCAA TAGCAACGGC GAGTACGCAC TGAGCTGCGG CAAAGACCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sly:101265694

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	48.98	2.00e-87	315.00
IUUC-Atr-002647	Amborella trichopoda	79.53	3.00e-147	513.00
IUUC-Aca-004948	Anolis carolinensis	50.88	4.00e-88	317.00
IUUC-Aly-006489	Arabidopsis lyrata	81.76	2.00e-143	500.00
IUUC-Ath-007099	Arabidopsis thaliana	80.87	1.00e-143	501.00
IUUC-Acl-008374	Aspergillus clavatus	37.16	2.00e-50	191.00
IUUC-Afl-008506	Aspergillus flavus	38.87	7.00e-51	193.00
IUUC-Afu-009098	Aspergillus fumigatus	31.96	8.00e-42	163.00
IUUC-Ang-009705	Aspergillus niger	36.28	3.00e-47	181.00
IUUC-Aor-010031	Aspergillus oryzae	38.87	6.00e-51	193.00
IUUC-Ame-011056	Astyanax mexicanus	48.15	8.00e-85	306.00
IUUC-Bgr-012109	Blumeria graminis	38.85	7.00e-47	180.00
IUUC-Bta-012476	Bos taurus	48.30	8.00e-88	315.00
IUUC-Bci-013860	Botrytis cinerea	34.78	8.00e-42	163.00
IUUC-Bdi-014565	Brachypodium distachyon	73.22	7.00e-136	475.00
IUUC-Bol-016204	Brassica oleracea	81.97	3.00e-142	496.00
IUUC-Bra-018093	Brassica rapa	81.97	6.00e-142	495.00
IUUC-Cel-018500	Caenorhabditis elegans	40.61	1.00e-66	245.00
IUUC-Cja-019279	Callithrix jacchus	49.82	6.00e-85	306.00
IUUC-Cfa-020516	Canis familiaris	48.64	4.00e-87	313.00
IUUC-Cpo-021427	Cavia porcellus	47.97	3.00e-83	300.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	54.92	2.00e-94	338.00
IUUC-Csa-023449	Chlorocebus sabaeus	49.47	7.00e-85	306.00
IUUC-Cin-025637	Ciona intestinalis	43.73	2.00e-74	271.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	37.05	2.00e-52	198.00
IUUC-Cne-026994	Cryptococcus neoformans	35.91	1.00e-55	209.00
IUUC-Dre-028239	Danio rerio	48.41	5.00e-82	296.00
IUUC-Dno-029408	Dasypus novemcinctus	48.31	2.00e-87	315.00
IUUC-Dor-030684	Dipodomys ordii	47.69	4.00e-54	203.00
IUUC-Dse-031344	Dothistroma septosporum	39.25	4.00e-44	170.00
IUUC-Dme-031634	Drosophila melanogaster	40.00	8.00e-60	223.00
IUUC-Ete-033126	Echinops telfairi	44.59	7.00e-76	276.00
IUUC-Eca-034356	Equus caballus	42.18	2.00e-69	254.00
IUUC-Eeu-035196	Erinaceus europaeus	49.33	2.00e-40	158.00
IUUC-Fca-036231	Felis catus	50.00	4.00e-88	317.00
IUUC-Fox-038076	Fusarium oxysporum	37.85	4.00e-48	184.00
IUUC-Fso-038093	Fusarium solani	36.15	4.00e-39	154.00
IUUC-Gmo-039056	Gadus morhua	46.46	5.00e-79	286.00
IUUC-Ggr-039981	Gaeumannomyces graminis	32.52	9.00e-42	163.00
IUUC-Gga-041042	Gallus gallus	45.92	3.00e-85	307.00
IUUC-Gac-042638	Gasterosteus aculeatus	46.46	8.00e-81	292.00
IUUC-Gma-042723	Glycine max	83.67	5.00e-152	529.00
IUUC-Ggo-044720	Gorilla gorilla	49.82	6.00e-85	306.00
IUUC-Hsa-046056	Homo sapiens	50.18	2.00e-85	308.00
IUUC-Hvu-047675	Hordeum vulgare	65.95	1.00e-129	455.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	47.96	8.00e-87	312.00
IUUC-Lch-050634	Latimeria chalumnae	47.57	1.00e-76	279.00
IUUC-Lpe-051470	Leersia perrieri	72.05	3.00e-133	466.00
IUUC-Loc-052452	Lepisosteus oculatus	48.43	2.00e-82	298.00
IUUC-Lma-053235	Leptosphaeria maculans	41.38	3.00e-30	125.00
IUUC-Laf-054315	Loxodonta africana	48.26	4.00e-84	303.00
IUUC-Mcc-054923	Macaca mulatta	49.12	3.00e-84	304.00
IUUC-Mor-056936	Magnaporthe oryzae	34.68	3.00e-41	161.00
IUUC-Mtr-058595	Medicago truncatula	82.71	3.00e-150	523.00
IUUC-Mla-058902	Melampsora laricipopulina	42.20	1.00e-65	242.00
IUUC-Mvi-060471	Microbotryum violaceum	43.75	2.00e-74	271.00
IUUC-Mmr-061665	Microcebus murinus	48.98	3.00e-87	313.00
IUUC-Mdo-062750	Monodelphis domestica	50.00	2.00e-73	268.00
IUUC-Mmu-063750	Mus musculus	48.65	4.00e-87	313.00
IUUC-Mac-065441	Musa acuminata	82.15	1.00e-150	524.00
IUUC-Mpu-066863	Mustela putorius furo	48.64	3.00e-87	314.00
IUUC-Mlu-067645	Myotis lucifugus	47.78	2.00e-85	308.00
IUUC-Nfi-068549	Neosartorya fischeri	35.53	2.00e-45	176.00
IUUC-Ncr-068816	Neurospora crassa	31.66	2.00e-33	135.00
IUUC-Nle-069457	Nomascus leucogenys	49.47	5.00e-85	306.00
IUUC-Ont-071674	Oreochromis niloticus	48.06	2.00e-71	261.00
IUUC-Oan-073391	Ornithorhynchus anatinus	50.17	3.00e-89	320.00
IUUC-Ocu-074186	Oryctolagus cuniculus	48.99	3.00e-85	307.00
IUUC-Oba-075414	Oryza barthii	75.18	3.00e-130	457.00
IUUC-Obr-076739	Oryza brachyantha	72.88	1.00e-133	468.00
IUUC-Ogl-076962	Oryza glaberrima	74.06	2.00e-134	470.00
IUUC-Ogu-078831	Oryza glumaepatula	74.40	2.00e-134	471.00
IUUC-Oin-079985	Oryza indica	74.06	2.00e-134	470.00
IUUC-Ome-081333	Oryza meridionalis	67.54	3.00e-123	434.00
IUUC-Oni-082558	Oryza nivara	74.06	2.00e-134	470.00
IUUC-Opu-084091	Oryza punctata	72.88	2.00e-133	467.00
IUUC-Oru-085253	Oryza rufipogon	73.74	2.00e-126	444.00
IUUC-Osa-086077	Oryza sativa	74.06	2.00e-134	470.00
IUUC-Ola-086946	Oryzias latipes	47.14	5.00e-82	296.00
IUUC-Olu-087604	Ostreococcus lucimarinus	40.71	8.00e-66	243.00
IUUC-Oga-088681	Otolemur garnettii	47.97	3.00e-86	310.00
IUUC-Oar-089913	Ovis aries	48.64	7.00e-88	316.00
IUUC-Ptr-091343	Pan troglodytes	49.82	3.00e-85	307.00
IUUC-Pan-092078	Papio anubis	49.47	7.00e-85	306.00
IUUC-Psi-093190	Pelodiscus sinensis	51.19	2.00e-88	317.00
IUUC-Pno-095078	Phaeosphaeria nodorum	33.33	6.00e-48	183.00
IUUC-Ppa-095777	Physcomitrella patens	68.58	1.00e-126	445.00
IUUC-Pfo-097153	Poecilia formosa	48.41	3.00e-81	294.00
IUUC-Pab-098307	Pongo abelii	50.00	4.00e-84	303.00
IUUC-Pop-099315	Populus trichocarpa	84.69	3.00e-146	509.00
IUUC-Pca-100538	Procavia capensis	50.00	1.00e-79	288.00
IUUC-Ppe-101632	Prunus persica	80.27	1.00e-150	524.00
IUUC-Pva-102484	Pteropus vampyrus	48.30	5.00e-87	313.00
IUUC-Pgr-103495	Puccinia graminis	44.52	1.00e-70	259.00
IUUC-Ptt-103975	Puccinia triticina	44.17	5.00e-70	256.00
IUUC-Pte-104354	Pyrenophora teres	33.68	2.00e-38	151.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	32.63	4.00e-37	147.00
IUUC-Rno-105655	Rattus norvegicus	48.65	4.00e-87	313.00
IUUC-Sha-107130	Sarcophilus harrisii	49.56	9.00e-62	229.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	38.31	7.00e-54	203.00
IUUC-Spo-108131	Schizosaccharomyces pombe	36.00	4.00e-49	187.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	33.01	4.00e-41	160.00
IUUC-Smo-108996	Selaginella moellendorffii	67.12	6.00e-115	405.00
IUUC-Sit-110508	Setaria italica	73.56	6.00e-136	475.00
IUUC-Stu-112380	Solanum tuberosum	98.66	2.00e-167	580.00
IUUC-Sar-113127	Sorex araneus	49.26	4.00e-37	147.00
IUUC-Sbi-114461	Sorghum bicolor	73.22	3.00e-135	473.00
IUUC-Sre-115020	Sporisorium reilianum	34.20	3.00e-34	139.00
IUUC-Ssc-115632	Sus scrofa	48.64	3.00e-87	313.00
IUUC-Tru-118039	Takifugu rubripes	45.05	2.00e-72	265.00
IUUC-Tsy-119239	Tarsius syrichta	49.38	5.00e-46	177.00
IUUC-Tni-120097	Tetraodon nigroviridis	45.79	5.00e-72	263.00
IUUC-Tca-121695	Theobroma cacao	83.28	4.00e-153	533.00
IUUC-Tre-122182	Trichoderma reesei	35.97	4.00e-44	171.00
IUUC-Tvi-122429	Trichoderma virens	36.61	1.00e-46	179.00
IUUC-Tae-125136	Triticum aestivum	72.20	4.00e-135	473.00
IUUC-Tur-126216	Triticum urartu	72.01	4.00e-134	469.00
IUUC-Tme-127030	Tuber melanosporum	41.48	1.00e-63	235.00
IUUC-Tbe-127686	Tupaia belangeri	46.37	7.00e-48	183.00
IUUC-Ttr-128770	Tursiops truncatus	47.30	3.00e-85	307.00
IUUC-Uma-129446	Ustilago maydis	34.73	3.00e-39	156.00
IUUC-Vda-129680	Verticillium dahliae	35.83	2.00e-38	151.00
IUUC-Vvi-131292	Vitis vinifera	83.89	2.00e-153	533.00
IUUC-Xtr-132204	Xenopus tropicalis	49.83	2.00e-88	318.00
IUUC-Xma-133727	Xiphophorus maculatus	48.06	1.00e-79	289.00
IUUC-Zma-135908	Zea mays	72.54	6.00e-124	436.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence