iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044208

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000837

Gene Name

LOC100783690; GLYMA_04G043300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G04590	GLYMA04G04590.3	GLYMA04G04590.3
GLYMA04G04590	GLYMA04G04590.4	GLYMA04G04590.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-51	171.5	494	532
UBD/Beta-Prp	2.60e-78	264.9	274	455

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d+v+++af ++  +l+sGs D  +++W++++g+ +k
   Q: 494  GHRDPVYSVAFsPNgEYLASGSMDRYLHIWSVKEGKIVK 532
           8***********777*******************99887 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvv 140
           s  ++++ vt+++++ dg +l+tgs D+ +++w+++ g+   tl++h   + sl+++++gd+l+sGs d+t+ vw+++tg++ + +++ h+g +
   Q: 274  STNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSID-GELNCTLNKHRGPIFSLKWNKKGDYLLSGSVDKTAIVWNIKTGEWKQ-LFEFHTGPT 365
           55678899*************************996.788899999**************************************.********* PP
   S: 141  ncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfsp 232
             v +   +  ++++s+D+++ + ++  ++ ++t++g h+d v+ +++d++g  l+s+s+d t k+w+l++ + ++ l++h + ++ +r sp
   Q: 366  LDVDWRN-NVSFATCSTDKMIHVCKIGENRPIKTFSG-HQDEVNAIKWDPSGSLLASCSDDHTAKIWSLKQDNFLHNLKEHVKGIYTIRWSP 455
           *****98.99**************************9.************************************************999876 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MISITSTELN YLVFRYLHES GFTHSAFAFG YEAGIDKNKN DDSVVPPGAL VTFIQKGIQY 60
LELEANLSGS DADMDEDFSF LQPLDLITKG PTELHNIVKA KKENLRQHKF ESNKIMNDLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAAAACCA CCTCACCACC TGCTGTGTCT TCCTCTAATA TGTGCAGTTT TCTCTGCAGT 60
TGACACTTGA AACCACAATC ACAATGATCT CAATCACTTC TACTGAATTG AACTACTTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0003714--F:transcription corepressor activity
GO:0016575--P:histone deacetylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

gmx:100783690

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001717	Ailuropoda melanoleuca	48.15	4.00e-144	504.00
IUUC-Apl-003232	Anas platyrhynchos	47.74	2.00e-150	525.00
IUUC-Aca-004611	Anolis carolinensis	48.77	3.00e-143	501.00
IUUC-Ago-007869	Ashbya gossypii	28.21	2.00e-31	130.00
IUUC-Bta-012418	Bos taurus	48.33	9.00e-153	533.00
IUUC-Cja-018832	Callithrix jacchus	48.33	2.00e-144	505.00
IUUC-Cfa-020029	Canis familiaris	48.33	1.00e-144	506.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	61.92	7.00e-132	464.00
IUUC-Csa-024075	Chlorocebus sabaeus	48.33	1.00e-144	506.00
IUUC-Cho-024872	Choloepus hoffmanni	32.07	2.00e-32	133.00
IUUC-Cin-025704	Ciona intestinalis	48.17	1.00e-151	530.00
IUUC-Csv-026257	Ciona savignyi	47.08	1.00e-147	516.00
IUUC-Cne-026946	Cryptococcus neoformans	36.65	5.00e-30	126.00
IUUC-Dre-027906	Danio rerio	47.98	3.00e-143	501.00
IUUC-Dno-029196	Dasypus novemcinctus	48.33	8.00e-145	506.00
IUUC-Dme-031939	Drosophila melanogaster	58.62	2.00e-123	436.00
IUUC-Eca-033897	Equus caballus	48.60	2.00e-152	531.00
IUUC-Eeu-034952	Erinaceus europaeus	43.72	7.00e-123	434.00
IUUC-Fca-035734	Felis catus	48.33	7.00e-145	507.00
IUUC-Fal-037388	Ficedula albicollis	48.60	6.00e-153	534.00
IUUC-Gmo-038870	Gadus morhua	47.80	1.00e-147	516.00
IUUC-Gga-040671	Gallus gallus	48.60	6.00e-153	534.00
IUUC-Gac-041844	Gasterosteus aculeatus	47.98	2.00e-150	525.00
IUUC-Ggo-044882	Gorilla gorilla	48.33	1.00e-144	506.00
IUUC-Hsa-046488	Homo sapiens	48.33	1.00e-144	506.00
IUUC-Kpa-049338	Komagataella pastoris	28.52	3.00e-31	129.00
IUUC-Lch-050535	Latimeria chalumnae	48.42	2.00e-151	528.00
IUUC-Laf-054280	Loxodonta africana	47.80	6.00e-152	530.00
IUUC-Mcc-055203	Macaca mulatta	48.33	1.00e-144	506.00
IUUC-Meu-056563	Macropus eugenii	65.82	7.00e-90	323.00
IUUC-Mga-059895	Meleagris gallopavo	47.80	5.00e-153	534.00
IUUC-Mvi-060557	Microbotryum violaceum	38.38	9.00e-76	278.00
IUUC-Mmr-061286	Microcebus murinus	47.90	9.00e-153	533.00
IUUC-Mdo-062078	Monodelphis domestica	48.25	3.00e-143	501.00
IUUC-Mpu-066741	Mustela putorius furo	48.33	1.00e-144	506.00
IUUC-Mlu-068152	Myotis lucifugus	48.33	1.00e-145	509.00
IUUC-Nle-069229	Nomascus leucogenys	48.33	1.00e-144	506.00
IUUC-Opr-070277	Ochotona princeps	41.56	2.00e-110	392.00
IUUC-Ont-071569	Oreochromis niloticus	48.15	9.00e-152	530.00
IUUC-Oan-073562	Ornithorhynchus anatinus	48.95	2.00e-152	532.00
IUUC-Ocu-074280	Oryctolagus cuniculus	49.03	8.00e-145	506.00
IUUC-Oar-089214	Ovis aries	48.15	7.00e-152	530.00
IUUC-Ptr-091532	Pan troglodytes	48.33	1.00e-144	506.00
IUUC-Pan-091927	Papio anubis	48.33	1.00e-144	506.00
IUUC-Psi-093941	Pelodiscus sinensis	48.08	3.00e-143	501.00
IUUC-Pfo-096158	Poecilia formosa	47.98	2.00e-150	525.00
IUUC-Pab-098705	Pongo abelii	48.33	1.00e-144	506.00
IUUC-Pca-100256	Procavia capensis	47.96	2.00e-141	495.00
IUUC-Ppe-101572	Prunus persica	70.63	0.00e+00	703.00
IUUC-Pva-102616	Pteropus vampyrus	48.49	8.00e-142	496.00
IUUC-Sha-107326	Sarcophilus harrisii	47.63	4.00e-153	534.00
IUUC-Sit-110710	Setaria italica	63.73	0.00e+00	686.00
IUUC-Sar-112971	Sorex araneus	43.19	2.00e-128	452.00
IUUC-Sbi-114420	Sorghum bicolor	65.49	0.00e+00	702.00
IUUC-Sre-115175	Sporisorium reilianum	44.76	9.00e-61	228.00
IUUC-Ssc-115646	Sus scrofa	48.60	9.00e-153	533.00
IUUC-Tgu-116898	Taeniopygia guttata	47.91	3.00e-151	528.00
IUUC-Tru-117862	Takifugu rubripes	47.81	1.00e-151	530.00
IUUC-Tsy-119424	Tarsius syrichta	39.82	8.00e-103	367.00
IUUC-Tni-119656	Tetraodon nigroviridis	48.86	1.00e-149	523.00
IUUC-Tur-126856	Triticum urartu	56.58	3.00e-113	402.00
IUUC-Tme-127126	Tuber melanosporum	36.34	2.00e-50	193.00
IUUC-Ttr-128826	Tursiops truncatus	47.46	5.00e-136	478.00
IUUC-Uma-129469	Ustilago maydis	44.00	2.00e-60	227.00
IUUC-Vpa-130768	Vicugna pacos	47.96	2.00e-141	496.00
IUUC-Xtr-132842	Xenopus tropicalis	45.26	2.00e-134	472.00
IUUC-Xma-134020	Xiphophorus maculatus	47.98	1.00e-150	526.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence