iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078852

Ensembl Protein ID

OGLUM02G19910.1

UniProt Accession

A0A0D9YTC2; A0A0D9YTC2_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM02G19910	OGLUM02G19910.1	OGLUM02G19910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.00e-31	108.0	23	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +vp +f+CpIsl++Mr Pv l++G+tydr+sI++w++sg++tcP t+ pl ++dlvPnltlrrli  w ++ 
   Q: 23   KVPTFFRCPISLDVMRSPVSLCTGVTYDRASIQRWIDSGNTTCPATMLPLPSTDLVPNLTLRRLIALWASTA 94
           589*****************************************************************9986 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MVRKEMGGGG GRLAAEYQGL EVKVPTFFRC PISLDVMRSP VSLCTGVTYD RASIQRWIDS 60
GNTTCPATML PLPSTDLVPN LTLRRLIALW ASTAAPPSSS SSPVAASAVG PTPAAAAAEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAGGA AGGAGATGGG CGGCGGCGGC GGCAGGCTCG CGGCGGAGTA CCAGGGCCTG 60
GAGGTAAAGG TCCCGACGTT CTTCCGGTGC CCCATCTCCC TCGACGTCAT GCGCTCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002532	Amborella trichopoda	35.71	9.00e-61	226.00
IUUC-Aly-005744	Arabidopsis lyrata	75.36	3.00e-30	125.00
IUUC-Ath-006814	Arabidopsis thaliana	32.74	8.00e-47	180.00
IUUC-Bdi-014371	Brachypodium distachyon	65.31	2.00e-127	448.00
IUUC-Bra-017320	Brassica rapa	71.23	3.00e-30	125.00
IUUC-Mac-064700	Musa acuminata	49.44	7.00e-84	303.00
IUUC-Oba-075887	Oryza barthii	98.51	2.00e-59	221.00
IUUC-Obr-076848	Oryza brachyantha	83.08	1.00e-72	265.00
IUUC-Ogl-077083	Oryza glaberrima	89.86	5.00e-109	387.00
IUUC-Oin-079861	Oryza indica	99.57	0.00e+00	647.00
IUUC-Olo-080339	Oryza longistaminata	70.69	4.00e-60	223.00
IUUC-Ome-081099	Oryza meridionalis	90.75	2.00e-169	587.00
IUUC-Oni-083066	Oryza nivara	99.57	0.00e+00	647.00
IUUC-Opu-083818	Oryza punctata	85.71	8.00e-156	542.00
IUUC-Oru-085038	Oryza rufipogon	86.60	5.00e-159	553.00
IUUC-Osa-086178	Oryza sativa	90.77	3.00e-163	567.00
IUUC-Pop-099916	Populus trichocarpa	34.93	1.00e-59	223.00
IUUC-Sit-110134	Setaria italica	74.03	7.00e-112	396.00
IUUC-Sly-111549	Solanum lycopersicum	35.08	1.00e-57	216.00
IUUC-Stu-112738	Solanum tuberosum	34.43	1.00e-56	213.00
IUUC-Sbi-113917	Sorghum bicolor	72.23	1.00e-119	422.00
IUUC-Sre-115187	Sporisorium reilianum	42.55	2.00e-06	45.80
IUUC-Tca-121270	Theobroma cacao	35.11	2.00e-60	225.00
IUUC-Tae-124143	Triticum aestivum	64.73	6.00e-124	436.00
IUUC-Vvi-131751	Vitis vinifera	37.14	1.00e-66	246.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence