iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095610

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544899

Gene Name

PHYPADRAFT_175055

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S10_161V6	PP1S10_161V6.1	PP1S10_161V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.30e-31	106.5	287	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+ef+CpIsl+lMrdPv++++G+tydr sI kw++ g+ tcP+ +q+l + +l+Pn++lr+li++wce+ 
   Q: 287  PPDEFRCPISLDLMRDPVIVATGQTYDRISISKWIEAGHLTCPKSGQKLGHVNLIPNYALRSLISQWCEDY 357
           79******************************************************************976 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAQIRRRGVF RQRAESPMAD MSPPPESMSS QALVNSIVAL AQQVASPDRP QLCQKRNAAN 60
LTRRIKLLSP LFEEIRDTNP PMPPSALIAF RDIFHVMSKT KELLDDCRES SVFLLVFRNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCATGGACT GTTTTGGCTC TCTTTTCTTG CTCGATGCGT GTAGCTCGCA GGATTTTTAG 60
GCTTACAGGA GCAGCAGAGT GTTTGCATCG CCGTGTCTGT GTTGCGTAAG AGGGTGATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ppp:PHYPADRAFT_175055

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042839	Glycine max	41.81	2.00e-118	419.00
IUUC-Mtr-058278	Medicago truncatula	43.13	3.00e-145	508.00
IUUC-Mac-065033	Musa acuminata	43.56	9.00e-100	357.00
IUUC-Pop-098818	Populus trichocarpa	46.19	8.00e-149	520.00
IUUC-Sly-111463	Solanum lycopersicum	42.30	6.00e-119	421.00
IUUC-Stu-112508	Solanum tuberosum	44.57	1.00e-148	519.00
IUUC-Sre-115187	Sporisorium reilianum	33.80	4.00e-07	48.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence