iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111549

Ensembl Protein ID

Solyc11g005700.1.1

UniProt Accession

K4D4I3; K4D4I3_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g005700.1	Solyc11g005700.1.1	Solyc11g005700.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.90e-31	106.7	10	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp++f+CpIsl++M+ Pv l++G+tydrssI++wl+sg++tcP t+q l+ +dlvPn+tl+rliq w e+ +
   Q: 10   VPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDSGNNTCPATMQVLQTKDLVPNYTLQRLIQIWSESVR 81
           8******************************************************************99865 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MRKDDLYVTV PSFFRCPISL DVMKSPVSLC TGVTYDRSSI QRWLDSGNNT CPATMQVLQT 60
KDLVPNYTLQ RLIQIWSESV RAQRSDTESN RVNSVSHDQV RELIKQFVNE FRVHSELEVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGAAGG ATGATCTGTA CGTAACGGTG CCGAGTTTTT TCCGGTGTCC GATATCACTC 60
GACGTGATGA AATCTCCGGT GAGTTTATGC ACCGGAGTTA CTTATGACCG GAGTAGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101243947

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002532	Amborella trichopoda	42.92	2.00e-91	328.00
IUUC-Aly-005744	Arabidopsis lyrata	45.98	5.00e-91	327.00
IUUC-Ath-007332	Arabidopsis thaliana	46.14	3.00e-91	327.00
IUUC-Bdi-014371	Brachypodium distachyon	80.88	6.00e-31	127.00
IUUC-Bol-015831	Brassica oleracea	47.11	1.00e-102	365.00
IUUC-Bra-017320	Brassica rapa	46.88	3.00e-96	344.00
IUUC-Gma-044154	Glycine max	50.69	7.00e-105	373.00
IUUC-Lpe-050922	Leersia perrieri	68.97	3.00e-21	95.50
IUUC-Mtr-057795	Medicago truncatula	52.20	5.00e-111	393.00
IUUC-Mac-064700	Musa acuminata	34.47	9.00e-51	193.00
IUUC-Obr-076531	Oryza brachyantha	67.24	3.00e-20	92.40
IUUC-Ogl-077245	Oryza glaberrima	68.97	3.00e-21	95.50
IUUC-Ogu-078852	Oryza glumaepatula	41.86	3.00e-32	132.00
IUUC-Oin-079861	Oryza indica	41.86	3.00e-32	132.00
IUUC-Ome-081099	Oryza meridionalis	43.93	2.00e-34	139.00
IUUC-Oni-083066	Oryza nivara	41.86	3.00e-32	132.00
IUUC-Opu-083818	Oryza punctata	77.46	3.00e-31	129.00
IUUC-Oru-084867	Oryza rufipogon	68.97	3.00e-21	95.50
IUUC-Osa-086178	Oryza sativa	77.46	2.00e-31	129.00
IUUC-Pop-099916	Populus trichocarpa	50.47	2.00e-111	395.00
IUUC-Ppe-101668	Prunus persica	50.45	5.00e-108	383.00
IUUC-Sit-110215	Setaria italica	73.21	2.00e-21	96.70
IUUC-Stu-112738	Solanum tuberosum	96.43	0.00e+00	833.00
IUUC-Sbi-114135	Sorghum bicolor	77.46	2.00e-30	125.00
IUUC-Sre-115187	Sporisorium reilianum	44.19	8.00e-07	47.00
IUUC-Tca-121270	Theobroma cacao	48.94	5.00e-100	357.00
IUUC-Tae-123183	Triticum aestivum	27.11	2.00e-35	142.00
IUUC-Vvi-131751	Vitis vinifera	50.82	2.00e-115	408.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence