iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121710

Ensembl Protein ID

EOY30471

UniProt Accession

A0A061GLQ5; A0A061GLQ5_THECC

Genbank Protein ID

EOY30471.1

Protein Name

Transducin family protein / WD-40 repeat family protein isoform 1

Genbank Nucleotide ID

CM001887

Gene Name

TCM_037671

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_037671	EOY30472	EOY30472
TCM_037671	EOY30471	EOY30471

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-23	82.3	274	311
UBD/Beta-Prp	8.40e-46	157.4	158	398

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlrtgvl 35
           gH++sv +l++ ++  + +vs+s Dgti +WD+r g++
   Q: 274  GHSASVEDLQWsPTepHAFVSCSVDGTIAIWDIRLGKS 311
           8***********5554559*************987765 PP

UBD/Beta-Prp

   S: 54   e............vtavkfspdgkilvtgseDrtikvwdls.....................tgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirv 120
           +            ++a++ +p+  i ++ ++ ++++vwd+s                     +  +++ ++gh+d+ +++++sp    +lv+G+  + i++
   Q: 158  QlrkvahhgcvnrIRAMTQNPH--ICASWADSGHVQVWDFSshlnalaesetegvqgassvfNQAPLVNFRGHKDEGYAIDWSPvVAGRLVTGDCKNCIHL 256
           0555555555444888888888..888888889*****999999999999**********99999*******************6669************* PP
   S: 121  wdletgqclee...tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkl.lrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlq....t 211
           w+  +g+  +    ++ gh+++v  ++++p++   +vs+s D+t+ +Wd++ gk     ++  h+ +v+ +s++++    l+sgs+dgt  + d++     
   Q: 257  WEPTSGSTWNVdatPFVGHSASVEDLQWSPTEpHAFVSCSVDGTIAIWDIRLGKSpAASFKA-HDADVNVVSWNRQAsCMLASGSDDGTFSIHDFRllkdG 356
           *9999987776788999*********************************998862566776.*********999874567899***********999987 PP
   S: 212  gecvrtlnghtdnvksvrfspnde.rlvsgssDgsiriWdlr 252
           +++v  ++ h+ +v+s++ sp++   l++ ssD+++ iWdl 
   Q: 357  NTVVAHFKYHKYPVTSIEWSPHEAsTLAVSSSDNQLTIWDLS 398
           778999999**********9776515566669*******975 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MARTLKNPKK AKRKNKGSKK GDGASASSSV PTIQPRVWQP GVDELEEGEE LQCDSSAYNS 60
LHAFHIGWPC LSFDIVRDSL GSDRKDFPHT VYFVTGTQAE KASWNSIGVF KVSNVSGKRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGAAAGCG CATAAGATCT TAAGCCCTAG CGGCCATCGA AAAACCCTCT CTGTTTTCTT 60
CTTCTCACTG CTACTCTGAA TAAACCCACA AAAACCAAAT GGCTCGCACT CTCAAAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

tcc:TCM_037671

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	63.99	1.00e-149	522.00
IUUC-Aml-002309	Ailuropoda melanoleuca	43.60	1.00e-93	336.00
IUUC-Atr-002461	Amborella trichopoda	66.06	1.00e-161	561.00
IUUC-Aca-004760	Anolis carolinensis	41.23	5.00e-84	303.00
IUUC-Aly-005405	Arabidopsis lyrata	75.45	0.00e+00	652.00
IUUC-Ath-007178	Arabidopsis thaliana	74.49	0.00e+00	660.00
IUUC-Ago-007735	Ashbya gossypii	35.39	3.00e-69	255.00
IUUC-Acl-008294	Aspergillus clavatus	37.31	3.00e-76	278.00
IUUC-Afl-008486	Aspergillus flavus	38.70	2.00e-77	281.00
IUUC-Afu-009019	Aspergillus fumigatus	37.75	5.00e-77	280.00
IUUC-Ani-009465	Aspergillus nidulans	38.91	4.00e-78	284.00
IUUC-Ang-009641	Aspergillus niger	38.57	1.00e-73	270.00
IUUC-Ate-010426	Aspergillus terreus	39.01	6.00e-79	287.00
IUUC-Ame-010856	Astyanax mexicanus	42.46	3.00e-89	321.00
IUUC-Bgr-012258	Blumeria graminis	38.46	3.00e-65	241.00
IUUC-Bta-012437	Bos taurus	43.78	3.00e-91	328.00
IUUC-Bci-013647	Botrytis cinerea	39.23	6.00e-76	277.00
IUUC-Bdi-014728	Brachypodium distachyon	68.97	3.00e-169	587.00
IUUC-Bol-015126	Brassica oleracea	74.72	0.00e+00	657.00
IUUC-Bra-017677	Brassica rapa	79.80	1.00e-83	301.00
IUUC-Cel-018454	Caenorhabditis elegans	41.27	9.00e-88	316.00
IUUC-Cja-018859	Callithrix jacchus	42.48	5.00e-91	327.00
IUUC-Cfa-020912	Canis familiaris	43.39	3.00e-91	328.00
IUUC-Cpo-021368	Cavia porcellus	44.21	2.00e-91	328.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	46.59	1.00e-52	199.00
IUUC-Csa-023599	Chlorocebus sabaeus	42.73	5.00e-93	333.00
IUUC-Cin-025718	Ciona intestinalis	43.52	3.00e-94	337.00
IUUC-Csv-025806	Ciona savignyi	47.37	2.00e-76	278.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	35.15	5.00e-61	227.00
IUUC-Cne-026781	Cryptococcus neoformans	37.28	2.00e-78	285.00
IUUC-Cme-027129	Cyanidioschyzon merolae	30.29	1.00e-49	189.00
IUUC-Dre-028225	Danio rerio	42.99	4.00e-92	330.00
IUUC-Dno-029792	Dasypus novemcinctus	43.68	9.00e-88	316.00
IUUC-Dor-030773	Dipodomys ordii	42.34	1.00e-44	173.00
IUUC-Dse-031289	Dothistroma septosporum	38.78	3.00e-74	271.00
IUUC-Dme-031676	Drosophila melanogaster	41.74	2.00e-91	328.00
IUUC-Eca-033618	Equus caballus	42.61	4.00e-90	324.00
IUUC-Fca-036102	Felis catus	43.17	4.00e-92	330.00
IUUC-Fox-037899	Fusarium oxysporum	38.66	3.00e-75	275.00
IUUC-Fso-038130	Fusarium solani	38.43	1.00e-74	272.00
IUUC-Gmo-038741	Gadus morhua	40.93	6.00e-87	313.00
IUUC-Ggr-040086	Gaeumannomyces graminis	37.84	6.00e-74	270.00
IUUC-Gac-042243	Gasterosteus aculeatus	42.92	5.00e-92	330.00
IUUC-Gma-044177	Glycine max	81.12	0.00e+00	691.00
IUUC-Ggo-044564	Gorilla gorilla	43.36	1.00e-92	332.00
IUUC-Hsa-046021	Homo sapiens	42.70	5.00e-93	333.00
IUUC-Hvu-047721	Hordeum vulgare	65.09	2.00e-161	561.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	42.48	6.00e-90	323.00
IUUC-Kpa-049271	Komagataella pastoris	37.77	8.00e-69	253.00
IUUC-Lch-049974	Latimeria chalumnae	41.19	8.00e-89	320.00
IUUC-Lpe-051388	Leersia perrieri	62.82	1.00e-145	508.00
IUUC-Lma-053010	Leptosphaeria maculans	37.39	3.00e-74	271.00
IUUC-Laf-054058	Loxodonta africana	44.91	3.00e-93	334.00
IUUC-Mcc-055246	Macaca mulatta	42.48	7.00e-93	333.00
IUUC-Meu-056795	Macropus eugenii	41.30	8.00e-89	320.00
IUUC-Mor-057175	Magnaporthe oryzae	37.41	7.00e-74	270.00
IUUC-Mpo-057388	Magnaporthe poae	35.94	2.00e-59	222.00
IUUC-Mtr-057752	Medicago truncatula	76.63	0.00e+00	671.00
IUUC-Mla-058904	Melampsora laricipopulina	37.72	2.00e-69	255.00
IUUC-Mvi-060525	Microbotryum violaceum	37.10	6.00e-74	270.00
IUUC-Mmr-060905	Microcebus murinus	42.70	2.00e-93	335.00
IUUC-Mmu-063428	Mus musculus	42.14	1.00e-92	332.00
IUUC-Mac-065276	Musa acuminata	72.25	2.00e-175	607.00
IUUC-Mpu-066062	Mustela putorius furo	41.83	4.00e-92	330.00
IUUC-Mlu-068115	Myotis lucifugus	52.70	1.00e-57	214.00
IUUC-Nfi-068512	Neosartorya fischeri	37.75	9.00e-76	276.00
IUUC-Ncr-068629	Neurospora crassa	35.64	1.00e-72	266.00
IUUC-Nle-070016	Nomascus leucogenys	42.36	7.00e-90	323.00
IUUC-Ont-072230	Oreochromis niloticus	42.86	4.00e-91	327.00
IUUC-Oan-072759	Ornithorhynchus anatinus	30.68	2.00e-55	209.00
IUUC-Ocu-074511	Oryctolagus cuniculus	44.21	4.00e-93	333.00
IUUC-Oba-075093	Oryza barthii	65.08	2.00e-156	544.00
IUUC-Obr-076130	Oryza brachyantha	66.67	2.00e-172	597.00
IUUC-Ogl-077397	Oryza glaberrima	68.25	5.00e-169	586.00
IUUC-Ogu-078111	Oryza glumaepatula	65.85	1.00e-147	516.00
IUUC-Oin-079162	Oryza indica	66.44	8.00e-161	559.00
IUUC-Olo-080909	Oryza longistaminata	55.38	1.00e-145	509.00
IUUC-Ome-081768	Oryza meridionalis	66.10	6.00e-148	516.00
IUUC-Oni-082453	Oryza nivara	66.74	3.00e-160	558.00
IUUC-Opu-084133	Oryza punctata	65.24	3.00e-140	491.00
IUUC-Oru-085056	Oryza rufipogon	62.36	4.00e-128	449.00
IUUC-Osa-085735	Oryza sativa	68.03	2.00e-168	584.00
IUUC-Ola-087066	Oryzias latipes	43.64	7.00e-87	313.00
IUUC-Olu-087594	Ostreococcus lucimarinus	47.69	5.00e-109	387.00
IUUC-Oga-087974	Otolemur garnettii	43.67	9.00e-92	329.00
IUUC-Oar-089902	Ovis aries	43.78	4.00e-91	327.00
IUUC-Ptr-090469	Pan troglodytes	40.26	3.00e-86	311.00
IUUC-Pan-092858	Papio anubis	44.21	1.00e-92	332.00
IUUC-Psi-094092	Pelodiscus sinensis	37.54	2.00e-44	171.00
IUUC-Pno-094919	Phaeosphaeria nodorum	37.70	3.00e-71	261.00
IUUC-Ppa-095849	Physcomitrella patens	57.48	7.00e-144	503.00
IUUC-Pfo-096535	Poecilia formosa	42.92	3.00e-91	327.00
IUUC-Pab-098478	Pongo abelii	42.05	3.00e-92	331.00
IUUC-Pop-098902	Populus trichocarpa	80.00	0.00e+00	687.00
IUUC-Pca-100403	Procavia capensis	47.37	5.00e-70	256.00
IUUC-Ppe-101997	Prunus persica	82.62	0.00e+00	704.00
IUUC-Pva-102423	Pteropus vampyrus	42.48	5.00e-92	330.00
IUUC-Pgr-103339	Puccinia graminis	37.80	3.00e-76	278.00
IUUC-Ptt-103937	Puccinia triticina	36.46	1.00e-75	276.00
IUUC-Pte-104051	Pyrenophora teres	37.70	5.00e-73	267.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	37.92	2.00e-73	269.00
IUUC-Rno-106118	Rattus norvegicus	44.79	3.00e-89	322.00
IUUC-Sce-106330	Saccharomyces cerevisiae	35.71	5.00e-63	234.00
IUUC-Sha-106564	Sarcophilus harrisii	41.56	6.00e-74	270.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	39.28	5.00e-83	300.00
IUUC-Spo-108351	Schizosaccharomyces pombe	39.40	2.00e-83	301.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	39.46	4.00e-78	284.00
IUUC-Smo-109619	Selaginella moellendorffii	54.50	5.00e-130	456.00
IUUC-Sit-109857	Setaria italica	68.26	4.00e-169	586.00
IUUC-Sly-111245	Solanum lycopersicum	69.78	3.00e-175	607.00
IUUC-Stu-112645	Solanum tuberosum	74.28	0.00e+00	655.00
IUUC-Sar-113342	Sorex araneus	42.26	2.00e-82	298.00
IUUC-Sbi-114359	Sorghum bicolor	68.49	6.00e-170	589.00
IUUC-Sre-115098	Sporisorium reilianum	38.73	2.00e-78	285.00
IUUC-Ssc-115496	Sus scrofa	42.92	8.00e-91	326.00
IUUC-Tru-117662	Takifugu rubripes	42.89	2.00e-90	325.00
IUUC-Tni-120564	Tetraodon nigroviridis	42.18	2.00e-75	275.00
IUUC-Tre-122239	Trichoderma reesei	39.58	5.00e-79	287.00
IUUC-Tvi-122589	Trichoderma virens	39.72	1.00e-78	285.00
IUUC-Tae-125820	Triticum aestivum	69.35	1.00e-169	588.00
IUUC-Tur-126135	Triticum urartu	64.30	5.00e-131	460.00
IUUC-Tme-127073	Tuber melanosporum	37.27	1.00e-67	249.00
IUUC-Ttr-128383	Tursiops truncatus	43.06	2.00e-88	318.00
IUUC-Uma-129345	Ustilago maydis	38.90	6.00e-79	287.00
IUUC-Vda-129893	Verticillium dahliae	38.22	3.00e-75	275.00
IUUC-Vvi-131067	Vitis vinifera	79.64	0.00e+00	705.00
IUUC-Xtr-132603	Xenopus tropicalis	43.91	7.00e-98	350.00
IUUC-Xma-133149	Xiphophorus maculatus	43.68	3.00e-91	327.00
IUUC-Yli-134459	Yarrowia lipolytica	38.44	3.00e-70	258.00
IUUC-Zma-135548	Zea mays	68.58	7.00e-166	576.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence