iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-118406

UUCD1 version

UUC-TaR-00127

Ensembl Protein ID

ENSTRUP00000006345.1

UniProt Accession

H2S1S4; H2S1S4_TAKRU

Protein Name

Uncharacterized protein

Gene Name

wdr3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000002727.1	ENSTRUT00000006385.1	ENSTRUP00000006345.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-45	150.0	587	625
UBD/Beta-Prp	2.50e-93	313.8	39	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v cl+  +d tl+++Gs D ++k+W l+ g++ +
   Q: 587  GHKLPVLCLDIcHDsTLIATGSADRNVKIWGLDFGDCHR 625
           7999*******9777*********************977 PP

UBD/Beta-Prp

   S: 67   lvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsG 155
           ++ ++  +++ +wd+++g+ v++l+g++++v+ l+ sp+g ++++G +d  +r++ l +g+     ++gh+++v+++++++ g  lv+G
   Q: 39   YIAAAACEHVFIWDVRKGEKVMILEGQKHEVTFLRPSPDGVSIAVGYEDGAVRIFSLLNGESNV-SFNGHKSAVSIICYDELGARLVTG 126
           55555567788****************************************************9.************************ PP
   S: 156  slDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDg 244
           s+D+ v +Wd+ +++ l++l+g h++ ++   f ++++ lv+ s+d+ vk wdl t++c +t  gh++ v+ + +++++ rl++gs+D 
   Q: 127  SKDTDVIVWDIINECGLYRLRG-HKGLITQALFLKDKNLLVTSSKDSFVKWWDLDTQHCFKTIVGHRSEVWGMVLLDRESRLLTGSADS 214
           *********************9.****************************************************************** PP
   S: 245  siriWdlrsgdllk 258
            +r Wd++  + +k
   Q: 215  ELRAWDITYLQEVK 228
           ******98766555 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGVIG SQKANIAYVT LRGGEKGRYI AAAACEHVFI WDVRKGEKVM 60
ILEGQKHEVT FLRPSPDGVS IAVGYEDGAV RIFSLLNGES NVSFNGHKSA VSIICYDELG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGTTGA CCAAGCAGTA CCTGCGCTAT GTTGCCAGCG CGGTGTTTGG AGTCATCGGT 60
AGCCAAAAGG CCAACATTGC CTACGTGACC CTGCGGGGGG GAGAGAAGGG TCGCTACATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

tru:101073349

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	36.92	7.00e-141	494.00
IUUC-Aml-001245	Ailuropoda melanoleuca	68.18	0.00e+00	1231.00
IUUC-Atr-002700	Amborella trichopoda	38.10	2.00e-171	596.00
IUUC-Apl-004164	Anas platyrhynchos	67.36	0.00e+00	920.00
IUUC-Aca-004765	Anolis carolinensis	64.15	0.00e+00	1162.00
IUUC-Aly-006503	Arabidopsis lyrata	40.62	3.00e-174	605.00
IUUC-Ath-006848	Arabidopsis thaliana	40.49	7.00e-179	621.00
IUUC-Ago-007909	Ashbya gossypii	35.47	2.00e-155	543.00
IUUC-Acl-008238	Aspergillus clavatus	38.23	7.00e-179	621.00
IUUC-Afl-008544	Aspergillus flavus	38.65	5.00e-175	608.00
IUUC-Afu-008868	Aspergillus fumigatus	38.60	1.00e-177	617.00
IUUC-Ani-009367	Aspergillus nidulans	39.09	3.00e-174	605.00
IUUC-Ang-009732	Aspergillus niger	38.40	3.00e-179	622.00
IUUC-Aor-010140	Aspergillus oryzae	38.71	1.00e-175	610.00
IUUC-Ate-010572	Aspergillus terreus	37.81	8.00e-174	604.00
IUUC-Ame-010956	Astyanax mexicanus	82.91	0.00e+00	909.00
IUUC-Bgr-012296	Blumeria graminis	36.85	2.00e-166	580.00
IUUC-Bta-012716	Bos taurus	66.60	0.00e+00	1228.00
IUUC-Bci-013699	Botrytis cinerea	36.49	8.00e-166	577.00
IUUC-Bdi-014525	Brachypodium distachyon	39.37	9.00e-143	501.00
IUUC-Bol-015117	Brassica oleracea	40.17	1.00e-169	590.00
IUUC-Bra-016869	Brassica rapa	40.02	1.00e-169	590.00
IUUC-Cel-018570	Caenorhabditis elegans	35.36	8.00e-134	471.00
IUUC-Cja-019425	Callithrix jacchus	67.93	0.00e+00	1234.00
IUUC-Cfa-020787	Canis familiaris	68.83	0.00e+00	1246.00
IUUC-Cpo-021729	Cavia porcellus	68.38	0.00e+00	903.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	44.79	2.00e-99	357.00
IUUC-Csa-024098	Chlorocebus sabaeus	68.07	0.00e+00	1241.00
IUUC-Cho-024495	Choloepus hoffmanni	59.80	0.00e+00	679.00
IUUC-Cin-025245	Ciona intestinalis	46.40	2.00e-159	555.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	37.46	2.00e-165	576.00
IUUC-Cne-026835	Cryptococcus neoformans	47.96	4.00e-129	456.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.32	2.00e-34	141.00
IUUC-Dre-027874	Danio rerio	78.77	0.00e+00	1444.00
IUUC-Dno-028905	Dasypus novemcinctus	68.18	0.00e+00	1239.00
IUUC-Dor-030383	Dipodomys ordii	62.29	2.00e-171	596.00
IUUC-Dse-031297	Dothistroma septosporum	35.08	1.00e-157	550.00
IUUC-Dme-031956	Drosophila melanogaster	42.46	0.00e+00	679.00
IUUC-Ete-032608	Echinops telfairi	60.40	0.00e+00	687.00
IUUC-Eca-034181	Equus caballus	66.38	0.00e+00	1208.00
IUUC-Eeu-034495	Erinaceus europaeus	68.50	0.00e+00	1192.00
IUUC-Fca-035994	Felis catus	69.37	0.00e+00	1171.00
IUUC-Fal-036611	Ficedula albicollis	66.45	0.00e+00	1174.00
IUUC-Fox-037807	Fusarium oxysporum	38.03	7.00e-172	597.00
IUUC-Fso-038090	Fusarium solani	38.13	5.00e-169	588.00
IUUC-Gmo-039018	Gadus morhua	70.82	0.00e+00	769.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.87	2.00e-173	602.00
IUUC-Gga-040707	Gallus gallus	65.55	0.00e+00	1165.00
IUUC-Gac-042334	Gasterosteus aculeatus	75.99	0.00e+00	786.00
IUUC-Gma-043033	Glycine max	38.01	8.00e-170	590.00
IUUC-Ggo-045334	Gorilla gorilla	68.14	0.00e+00	1222.00
IUUC-Hsa-046996	Homo sapiens	68.40	0.00e+00	1228.00
IUUC-Hvu-047381	Hordeum vulgare	34.05	3.00e-83	302.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	68.21	0.00e+00	1224.00
IUUC-Kpa-049185	Komagataella pastoris	34.05	4.00e-144	505.00
IUUC-Lch-050098	Latimeria chalumnae	63.84	0.00e+00	1092.00
IUUC-Lpe-050710	Leersia perrieri	36.38	6.00e-152	531.00
IUUC-Loc-052745	Lepisosteus oculatus	72.11	0.00e+00	1284.00
IUUC-Lma-053104	Leptosphaeria maculans	37.99	4.00e-172	599.00
IUUC-Laf-054395	Loxodonta africana	66.56	0.00e+00	1229.00
IUUC-Mcc-055077	Macaca mulatta	68.18	0.00e+00	1236.00
IUUC-Meu-056418	Macropus eugenii	66.15	2.00e-168	586.00
IUUC-Mor-057031	Magnaporthe oryzae	37.32	1.00e-153	536.00
IUUC-Mpo-057420	Magnaporthe poae	38.11	4.00e-169	588.00
IUUC-Mtr-057838	Medicago truncatula	38.62	5.00e-177	615.00
IUUC-Mla-058854	Melampsora laricipopulina	35.79	4.00e-149	522.00
IUUC-Mga-060120	Meleagris gallopavo	62.23	0.00e+00	1080.00
IUUC-Mvi-060407	Microbotryum violaceum	45.79	1.00e-140	494.00
IUUC-Mmr-060635	Microcebus murinus	68.54	0.00e+00	1226.00
IUUC-Mdo-063023	Monodelphis domestica	66.56	0.00e+00	1233.00
IUUC-Mmu-064103	Mus musculus	67.09	0.00e+00	1229.00
IUUC-Mac-065569	Musa acuminata	37.80	8.00e-166	577.00
IUUC-Mpu-066462	Mustela putorius furo	68.36	0.00e+00	1243.00
IUUC-Mlu-067894	Myotis lucifugus	67.97	0.00e+00	1230.00
IUUC-Nfi-068321	Neosartorya fischeri	37.89	8.00e-177	614.00
IUUC-Ncr-068661	Neurospora crassa	38.16	9.00e-173	600.00
IUUC-Nle-069409	Nomascus leucogenys	67.86	0.00e+00	1222.00
IUUC-Opr-070445	Ochotona princeps	60.08	0.00e+00	1145.00
IUUC-Ont-072339	Oreochromis niloticus	84.82	0.00e+00	1509.00
IUUC-Oan-073688	Ornithorhynchus anatinus	67.86	0.00e+00	1170.00
IUUC-Ocu-074227	Oryctolagus cuniculus	68.72	0.00e+00	1247.00
IUUC-Oba-075635	Oryza barthii	36.36	7.00e-148	518.00
IUUC-Obr-076897	Oryza brachyantha	37.80	7.00e-160	557.00
IUUC-Ogl-077555	Oryza glaberrima	36.26	1.00e-147	517.00
IUUC-Ogu-078724	Oryza glumaepatula	36.47	4.00e-148	518.00
IUUC-Oin-080030	Oryza indica	36.26	2.00e-147	516.00
IUUC-Olo-080687	Oryza longistaminata	34.44	2.00e-135	476.00
IUUC-Ome-081867	Oryza meridionalis	36.57	2.00e-148	520.00
IUUC-Oni-082559	Oryza nivara	36.26	2.00e-147	516.00
IUUC-Opu-083332	Oryza punctata	38.24	3.00e-143	502.00
IUUC-Oru-084455	Oryza rufipogon	36.26	2.00e-147	516.00
IUUC-Osa-085793	Oryza sativa	36.26	2.00e-147	516.00
IUUC-Ola-087395	Oryzias latipes	81.86	0.00e+00	1345.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.63	7.00e-150	524.00
IUUC-Oga-088574	Otolemur garnettii	68.83	0.00e+00	1246.00
IUUC-Oar-089453	Ovis aries	66.77	0.00e+00	1231.00
IUUC-Ptr-090694	Pan troglodytes	68.18	0.00e+00	1224.00
IUUC-Pan-092420	Papio anubis	67.93	0.00e+00	1231.00
IUUC-Psi-093683	Pelodiscus sinensis	67.93	0.00e+00	1204.00
IUUC-Pma-094197	Petromyzon marinus	56.33	2.00e-70	258.00
IUUC-Pno-094783	Phaeosphaeria nodorum	37.34	8.00e-172	597.00
IUUC-Ppa-095208	Physcomitrella patens	40.23	1.00e-173	603.00
IUUC-Pfo-096299	Poecilia formosa	83.26	0.00e+00	1498.00
IUUC-Pab-098706	Pongo abelii	68.26	0.00e+00	1227.00
IUUC-Pop-099275	Populus trichocarpa	38.94	3.00e-166	579.00
IUUC-Pca-100796	Procavia capensis	55.31	0.00e+00	867.00
IUUC-Ppe-101861	Prunus persica	39.85	3.00e-175	609.00
IUUC-Pva-103241	Pteropus vampyrus	63.05	0.00e+00	1086.00
IUUC-Pgr-103432	Puccinia graminis	43.60	2.00e-121	430.00
IUUC-Ptt-103742	Puccinia triticina	39.72	7.00e-108	385.00
IUUC-Pte-104069	Pyrenophora teres	37.51	1.00e-164	573.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	37.15	3.00e-171	595.00
IUUC-Rno-105219	Rattus norvegicus	66.24	0.00e+00	1192.00
IUUC-Sce-106271	Saccharomyces cerevisiae	36.23	8.00e-165	574.00
IUUC-Sha-107550	Sarcophilus harrisii	66.74	0.00e+00	1214.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	35.51	4.00e-155	541.00
IUUC-Spo-108239	Schizosaccharomyces pombe	36.14	3.00e-162	565.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	36.59	8.00e-164	571.00
IUUC-Smo-108974	Selaginella moellendorffii	39.78	8.00e-168	584.00
IUUC-Sit-110000	Setaria italica	37.75	1.00e-148	520.00
IUUC-Sly-111595	Solanum lycopersicum	38.68	5.00e-167	581.00
IUUC-Stu-112516	Solanum tuberosum	38.82	1.00e-166	580.00
IUUC-Sar-113195	Sorex araneus	60.11	0.00e+00	984.00
IUUC-Sbi-114465	Sorghum bicolor	36.78	2.00e-156	546.00
IUUC-Sre-115006	Sporisorium reilianum	34.13	5.00e-141	495.00
IUUC-Ssc-115929	Sus scrofa	66.28	0.00e+00	1211.00
IUUC-Tgu-117282	Taeniopygia guttata	66.34	0.00e+00	1168.00
IUUC-Tsy-119170	Tarsius syrichta	66.63	0.00e+00	1210.00
IUUC-Tni-119721	Tetraodon nigroviridis	85.59	0.00e+00	1457.00
IUUC-Tca-121761	Theobroma cacao	39.24	2.00e-176	612.00
IUUC-Tre-121908	Trichoderma reesei	37.62	2.00e-170	593.00
IUUC-Tvi-122547	Trichoderma virens	37.54	7.00e-171	594.00
IUUC-Tae-125496	Triticum aestivum	37.70	6.00e-152	531.00
IUUC-Tur-126811	Triticum urartu	39.26	3.00e-152	532.00
IUUC-Tme-126987	Tuber melanosporum	38.30	6.00e-175	607.00
IUUC-Tbe-127315	Tupaia belangeri	71.67	0.00e+00	672.00
IUUC-Ttr-129165	Tursiops truncatus	60.93	0.00e+00	1038.00
IUUC-Uma-129651	Ustilago maydis	34.25	2.00e-141	497.00
IUUC-Vda-129973	Verticillium dahliae	38.50	2.00e-167	583.00
IUUC-Vpa-130163	Vicugna pacos	54.74	2.00e-143	503.00
IUUC-Vvi-131402	Vitis vinifera	38.00	2.00e-168	586.00
IUUC-Xtr-132296	Xenopus tropicalis	67.28	0.00e+00	1199.00
IUUC-Xma-133028	Xiphophorus maculatus	82.93	0.00e+00	1502.00
IUUC-Yli-134484	Yarrowia lipolytica	36.62	4.00e-154	538.00
IUUC-Zma-135938	Zea mays	36.58	3.00e-155	542.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence