iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pab-098070

Ensembl Protein ID

ENSPPYP00000006153.2

UniProt Accession

H2NK04; H2NK04_PONAB

Genbank Protein ID

ENSPPYP00000006153

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01054497

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000005401.2	ENSPPYT00000006395.2	ENSPPYP00000006153.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.80e-08	34.4	288	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 288  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLT 325
           78999*******************************97 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MAQVADAALS QSVWYLSDEG IEACTSSPDK VNVNDIILIA LNTDLRTIGK KFLPSDINSG 60
KVEKLEGPCV LQIQKIRNVA APKDNEESQA APRMLRLQMT DGHISCTAVE FSYMSEISLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCAGG TGGCCGACGC GGCGTTGTCC CAGTCGGTTT GGTAAGTGGC GAGTCCCTTT 60
GGTTGTTGGG CCTCGGGTGT GGGCCGGGCC CCCATTGAGT TTGGGTTGTG GGCTGCGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	31.51	1.00e-15	77.40
IUUC-Aml-001751	Ailuropoda melanoleuca	92.49	0.00e+00	1319.00
IUUC-Atr-002788	Amborella trichopoda	29.08	1.00e-20	94.40
IUUC-Apl-004055	Anas platyrhynchos	76.10	0.00e+00	952.00
IUUC-Aca-004367	Anolis carolinensis	72.75	0.00e+00	1030.00
IUUC-Aly-006072	Arabidopsis lyrata	36.31	7.00e-23	101.00
IUUC-Ath-007491	Arabidopsis thaliana	35.67	2.00e-22	100.00
IUUC-Ame-011439	Astyanax mexicanus	49.81	2.00e-161	562.00
IUUC-Bta-012894	Bos taurus	88.17	0.00e+00	1283.00
IUUC-Bdi-014462	Brachypodium distachyon	30.53	4.00e-20	92.00
IUUC-Bol-015343	Brassica oleracea	37.50	2.00e-23	103.00
IUUC-Bra-016787	Brassica rapa	37.11	6.00e-23	101.00
IUUC-Cel-018154	Caenorhabditis elegans	34.68	4.00e-27	116.00
IUUC-Cja-019364	Callithrix jacchus	95.24	0.00e+00	1202.00
IUUC-Cfa-021166	Canis familiaris	91.13	0.00e+00	1280.00
IUUC-Cpo-021678	Cavia porcellus	83.20	0.00e+00	967.00
IUUC-Csa-023299	Chlorocebus sabaeus	97.31	0.00e+00	1454.00
IUUC-Cho-024694	Choloepus hoffmanni	96.17	1.00e-140	493.00
IUUC-Cin-025191	Ciona intestinalis	41.38	1.00e-42	166.00
IUUC-Csv-026348	Ciona savignyi	52.94	2.00e-12	63.90
IUUC-Dre-028715	Danio rerio	49.87	3.00e-171	595.00
IUUC-Dno-030091	Dasypus novemcinctus	88.44	0.00e+00	1308.00
IUUC-Dor-030807	Dipodomys ordii	80.03	0.00e+00	986.00
IUUC-Dse-031459	Dothistroma septosporum	23.83	1.00e-02	35.40
IUUC-Dme-031770	Drosophila melanogaster	32.71	8.00e-42	165.00
IUUC-Ete-032507	Echinops telfairi	67.78	0.00e+00	691.00
IUUC-Eca-033406	Equus caballus	91.10	0.00e+00	1038.00
IUUC-Eeu-034600	Erinaceus europaeus	81.41	0.00e+00	966.00
IUUC-Fca-035916	Felis catus	92.19	0.00e+00	1314.00
IUUC-Fal-036658	Ficedula albicollis	74.23	0.00e+00	999.00
IUUC-Gmo-038974	Gadus morhua	55.70	3.00e-103	369.00
IUUC-Gga-040195	Gallus gallus	75.47	0.00e+00	1069.00
IUUC-Gac-042537	Gasterosteus aculeatus	47.11	2.00e-163	568.00
IUUC-Gma-044234	Glycine max	40.00	2.00e-24	107.00
IUUC-Ggo-044715	Gorilla gorilla	98.01	0.00e+00	1283.00
IUUC-Hsa-045814	Homo sapiens	99.06	0.00e+00	1476.00
IUUC-Hvu-047365	Hordeum vulgare	30.61	3.00e-16	79.30
IUUC-Itr-047866	Ictidomys tridecemlineatus	91.51	0.00e+00	1313.00
IUUC-Lch-050393	Latimeria chalumnae	62.28	0.00e+00	812.00
IUUC-Lpe-050691	Leersia perrieri	32.91	6.00e-20	91.70
IUUC-Loc-052859	Lepisosteus oculatus	57.69	0.00e+00	713.00
IUUC-Laf-053953	Loxodonta africana	88.34	0.00e+00	862.00
IUUC-Mcc-055846	Macaca mulatta	97.26	0.00e+00	1427.00
IUUC-Meu-056790	Macropus eugenii	69.33	0.00e+00	856.00
IUUC-Mtr-058749	Medicago truncatula	40.13	5.00e-21	95.50
IUUC-Mla-058959	Melampsora laricipopulina	39.71	3.00e-06	46.20
IUUC-Mga-059656	Meleagris gallopavo	75.14	0.00e+00	990.00
IUUC-Mmr-061089	Microcebus murinus	91.00	0.00e+00	1276.00
IUUC-Mdo-063043	Monodelphis domestica	69.11	0.00e+00	745.00
IUUC-Mmu-063654	Mus musculus	84.41	0.00e+00	1192.00
IUUC-Mac-064947	Musa acuminata	34.04	5.00e-19	88.60
IUUC-Mpu-066115	Mustela putorius furo	91.35	0.00e+00	1055.00
IUUC-Mlu-066974	Myotis lucifugus	85.43	0.00e+00	1168.00
IUUC-Nle-069184	Nomascus leucogenys	98.25	0.00e+00	1465.00
IUUC-Opr-070770	Ochotona princeps	81.87	0.00e+00	1030.00
IUUC-Ont-072040	Oreochromis niloticus	60.22	2.00e-140	493.00
IUUC-Oan-073448	Ornithorhynchus anatinus	84.66	3.00e-69	254.00
IUUC-Ocu-074405	Oryctolagus cuniculus	92.34	0.00e+00	1337.00
IUUC-Oba-075977	Oryza barthii	30.97	7.00e-13	68.20
IUUC-Obr-076298	Oryza brachyantha	32.69	3.00e-18	85.90
IUUC-Ogl-077706	Oryza glaberrima	31.61	6.00e-13	68.60
IUUC-Ogu-078381	Oryza glumaepatula	31.45	9.00e-14	70.90
IUUC-Oin-080150	Oryza indica	32.08	2.00e-13	69.70
IUUC-Ome-081153	Oryza meridionalis	30.23	9.00e-13	67.80
IUUC-Oni-083115	Oryza nivara	31.45	5.00e-13	68.60
IUUC-Opu-083860	Oryza punctata	31.65	5.00e-18	85.50
IUUC-Oru-084859	Oryza rufipogon	32.08	3.00e-13	69.70
IUUC-Osa-085567	Oryza sativa	32.08	5.00e-12	65.50
IUUC-Ola-087049	Oryzias latipes	47.00	2.00e-169	589.00
IUUC-Oga-088455	Otolemur garnettii	91.40	0.00e+00	1341.00
IUUC-Oar-090096	Ovis aries	90.96	0.00e+00	1319.00
IUUC-Ptr-090974	Pan troglodytes	98.77	0.00e+00	1299.00
IUUC-Pan-092657	Papio anubis	96.91	0.00e+00	1450.00
IUUC-Psi-093113	Pelodiscus sinensis	75.65	0.00e+00	941.00
IUUC-Ppa-095466	Physcomitrella patens	37.93	4.00e-23	102.00
IUUC-Pfo-096631	Poecilia formosa	47.70	6.00e-166	577.00
IUUC-Pop-099235	Populus trichocarpa	35.43	2.00e-22	100.00
IUUC-Pca-101032	Procavia capensis	82.64	0.00e+00	1060.00
IUUC-Ppe-101793	Prunus persica	34.50	6.00e-23	101.00
IUUC-Pva-102290	Pteropus vampyrus	89.86	0.00e+00	1158.00
IUUC-Rno-105080	Rattus norvegicus	84.02	0.00e+00	999.00
IUUC-Sce-106191	Saccharomyces cerevisiae	40.00	3.00e-03	37.00
IUUC-Sha-107598	Sarcophilus harrisii	79.16	0.00e+00	1126.00
IUUC-Sit-110735	Setaria italica	31.38	1.00e-18	87.40
IUUC-Sly-111126	Solanum lycopersicum	41.45	4.00e-21	95.50
IUUC-Stu-112780	Solanum tuberosum	37.42	3.00e-24	106.00
IUUC-Sar-113418	Sorex araneus	87.58	0.00e+00	1089.00
IUUC-Sbi-113925	Sorghum bicolor	31.15	2.00e-19	90.10
IUUC-Sre-114917	Sporisorium reilianum	38.55	2.00e-07	50.10
IUUC-Ssc-115712	Sus scrofa	91.54	0.00e+00	1353.00
IUUC-Tgu-117148	Taeniopygia guttata	75.37	0.00e+00	1052.00
IUUC-Tru-117831	Takifugu rubripes	46.46	5.00e-160	558.00
IUUC-Tsy-118917	Tarsius syrichta	90.78	0.00e+00	1114.00
IUUC-Tni-120783	Tetraodon nigroviridis	56.82	3.00e-128	452.00
IUUC-Tca-121430	Theobroma cacao	40.00	1.00e-08	54.30
IUUC-Tae-123752	Triticum aestivum	31.51	8.00e-16	78.20
IUUC-Tur-126238	Triticum urartu	32.43	3.00e-15	75.90
IUUC-Ttr-128615	Tursiops truncatus	85.54	0.00e+00	1076.00
IUUC-Vpa-130531	Vicugna pacos	91.86	0.00e+00	1189.00
IUUC-Vvi-131607	Vitis vinifera	39.74	2.00e-17	83.60
IUUC-Xtr-132787	Xenopus tropicalis	59.12	0.00e+00	748.00
IUUC-Xma-133815	Xiphophorus maculatus	47.72	8.00e-166	577.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence