iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107654

Ensembl Protein ID

EEB08739

UniProt Accession

B6K5D5; B6K5D5_SCHJY

Genbank Protein ID

EEB08739.1

Protein Name

COPII-coated vesicle component Sec13

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_03907

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_03907	EEB08739	EEB08739

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-24	83.1	51	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWDlrtg 33
           gHt++v+ l++  +   t+l+s+s+Dg + vW+  +g
   Q: 51   GHTGPVWQLDWahPKfgTILASASYDGHVIVWREQDG 87
           8***********9555599*************96555 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MTSLDTQHDD MIHDAVLDYY GKRLATCSSD HTIKVFSVDG NQHRLQETLK GHTGPVWQLD 60
WAHPKFGTIL ASASYDGHVI VWREQDGTWK QLYDHALHQA SVNSVSWAPH EYGALLACAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATCGCTGCA GTTCCCTGTG TGTCCTGCGA CGCGCACTCC TCTTCCTCCT ACCAACAACG 60
CTACTCCCTC CTTTGCAGAA TCACCATGAC TAGCTTAGAC ACCCAACATG ATGATATGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	48.01	8.00e-77	278.00
IUUC-Aml-001832	Ailuropoda melanoleuca	49.50	2.00e-82	296.00
IUUC-Atr-002914	Amborella trichopoda	49.16	4.00e-76	275.00
IUUC-Apl-003992	Anas platyrhynchos	50.17	5.00e-78	282.00
IUUC-Aca-005283	Anolis carolinensis	48.84	3.00e-81	293.00
IUUC-Aly-005654	Arabidopsis lyrata	47.16	8.00e-72	261.00
IUUC-Ath-006810	Arabidopsis thaliana	47.18	6.00e-72	261.00
IUUC-Ago-007827	Ashbya gossypii	57.24	8.00e-101	357.00
IUUC-Acl-008205	Aspergillus clavatus	54.70	5.00e-89	318.00
IUUC-Afl-008748	Aspergillus flavus	55.26	5.00e-92	328.00
IUUC-Afu-008791	Aspergillus fumigatus	54.70	1.00e-88	317.00
IUUC-Ani-009152	Aspergillus nidulans	53.62	5.00e-92	328.00
IUUC-Ang-009765	Aspergillus niger	54.93	3.00e-91	325.00
IUUC-Aor-009927	Aspergillus oryzae	54.88	1.00e-88	317.00
IUUC-Ate-010248	Aspergillus terreus	54.61	4.00e-91	325.00
IUUC-Ame-011478	Astyanax mexicanus	48.01	7.00e-81	291.00
IUUC-Bgr-012276	Blumeria graminis	53.23	1.00e-87	314.00
IUUC-Bta-012700	Bos taurus	49.50	4.00e-82	295.00
IUUC-Bci-013722	Botrytis cinerea	54.46	6.00e-91	325.00
IUUC-Bdi-014818	Brachypodium distachyon	48.34	9.00e-78	281.00
IUUC-Bol-015779	Brassica oleracea	47.99	1.00e-71	260.00
IUUC-Bra-016973	Brassica rapa	47.10	1.00e-71	262.00
IUUC-Cel-018479	Caenorhabditis elegans	41.32	2.00e-61	226.00
IUUC-Cja-019956	Callithrix jacchus	51.57	7.00e-81	291.00
IUUC-Cfa-020752	Canis familiaris	49.50	2.00e-82	296.00
IUUC-Cpo-021871	Cavia porcellus	50.00	4.00e-84	302.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	49.67	2.00e-79	286.00
IUUC-Csa-023393	Chlorocebus sabaeus	50.17	2.00e-83	300.00
IUUC-Cho-024786	Choloepus hoffmanni	42.54	1.00e-31	128.00
IUUC-Cin-025332	Ciona intestinalis	51.32	2.00e-83	300.00
IUUC-Csv-025926	Ciona savignyi	51.32	2.00e-83	300.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	53.95	1.00e-84	304.00
IUUC-Cne-027054	Cryptococcus neoformans	48.76	3.00e-83	299.00
IUUC-Cme-027165	Cyanidioschyzon merolae	39.27	7.00e-56	209.00
IUUC-Dre-027782	Danio rerio	48.01	2.00e-79	286.00
IUUC-Dno-029628	Dasypus novemcinctus	48.84	6.00e-82	295.00
IUUC-Dor-030650	Dipodomys ordii	51.07	7.00e-67	245.00
IUUC-Dse-031206	Dothistroma septosporum	51.99	2.00e-85	306.00
IUUC-Dme-031854	Drosophila melanogaster	49.17	4.00e-74	269.00
IUUC-Ete-032618	Echinops telfairi	34.65	6.00e-42	162.00
IUUC-Eca-033268	Equus caballus	50.17	5.00e-83	298.00
IUUC-Fca-035918	Felis catus	49.17	7.00e-82	295.00
IUUC-Fal-037551	Ficedula albicollis	49.83	2.00e-74	270.00
IUUC-Fox-037763	Fusarium oxysporum	55.15	6.00e-90	321.00
IUUC-Fso-038341	Fusarium solani	54.28	2.00e-88	316.00
IUUC-Gmo-038638	Gadus morhua	48.84	4.00e-81	292.00
IUUC-Ggr-039865	Gaeumannomyces graminis	55.33	7.00e-92	328.00
IUUC-Gga-040193	Gallus gallus	50.17	1.00e-82	297.00
IUUC-Gma-043518	Glycine max	48.99	9.00e-76	274.00
IUUC-Ggo-045252	Gorilla gorilla	49.50	1.00e-82	298.00
IUUC-Hsa-046565	Homo sapiens	49.17	5.00e-82	295.00
IUUC-Hvu-047835	Hordeum vulgare	47.35	2.00e-76	276.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	49.67	4.00e-83	298.00
IUUC-Kpa-049148	Komagataella pastoris	56.90	8.00e-101	357.00
IUUC-Lch-050421	Latimeria chalumnae	49.50	1.00e-81	293.00
IUUC-Lpe-051187	Leersia perrieri	47.52	1.00e-77	283.00
IUUC-Loc-052167	Lepisosteus oculatus	48.51	2.00e-82	296.00
IUUC-Lma-053250	Leptosphaeria maculans	55.25	1.00e-88	317.00
IUUC-Laf-054304	Loxodonta africana	49.67	7.00e-84	301.00
IUUC-Mcc-055519	Macaca mulatta	50.17	2.00e-83	300.00
IUUC-Meu-056439	Macropus eugenii	49.50	5.00e-83	298.00
IUUC-Mor-057241	Magnaporthe oryzae	57.48	6.00e-91	325.00
IUUC-Mpo-057373	Magnaporthe poae	50.68	5.00e-76	275.00
IUUC-Mtr-058412	Medicago truncatula	48.32	1.00e-74	270.00
IUUC-Mla-058966	Melampsora laricipopulina	49.54	2.00e-90	323.00
IUUC-Mga-060066	Meleagris gallopavo	50.17	5.00e-78	282.00
IUUC-Mvi-060290	Microbotryum violaceum	48.11	3.00e-83	302.00
IUUC-Mmr-060717	Microcebus murinus	49.83	5.00e-83	298.00
IUUC-Mdo-062496	Monodelphis domestica	49.17	1.00e-82	297.00
IUUC-Mmu-063490	Mus musculus	50.00	1.00e-83	300.00
IUUC-Mac-065307	Musa acuminata	48.33	2.00e-75	274.00
IUUC-Mpu-066601	Mustela putorius furo	49.50	2.00e-82	296.00
IUUC-Mlu-067501	Myotis lucifugus	49.50	1.00e-82	297.00
IUUC-Nfi-068360	Neosartorya fischeri	51.92	4.00e-70	255.00
IUUC-Ncr-068928	Neurospora crassa	58.39	5.00e-96	342.00
IUUC-Nle-069028	Nomascus leucogenys	49.17	1.00e-82	297.00
IUUC-Opr-070446	Ochotona princeps	49.66	2.00e-78	283.00
IUUC-Ont-071587	Oreochromis niloticus	49.67	3.00e-83	299.00
IUUC-Oan-073211	Ornithorhynchus anatinus	48.01	7.00e-82	295.00
IUUC-Ocu-074306	Oryctolagus cuniculus	49.83	9.00e-83	298.00
IUUC-Oba-075069	Oryza barthii	47.68	2.00e-76	276.00
IUUC-Obr-076667	Oryza brachyantha	48.34	2.00e-77	280.00
IUUC-Ogl-077208	Oryza glaberrima	47.68	2.00e-76	276.00
IUUC-Ogu-078513	Oryza glumaepatula	47.68	2.00e-76	276.00
IUUC-Oin-079094	Oryza indica	47.68	2.00e-76	276.00
IUUC-Olo-080473	Oryza longistaminata	47.68	2.00e-76	276.00
IUUC-Ome-081643	Oryza meridionalis	47.68	2.00e-76	276.00
IUUC-Oni-082589	Oryza nivara	47.68	2.00e-76	276.00
IUUC-Opu-083677	Oryza punctata	47.68	2.00e-76	276.00
IUUC-Oru-084537	Oryza rufipogon	47.68	2.00e-76	276.00
IUUC-Osa-085449	Oryza sativa	47.68	2.00e-76	276.00
IUUC-Ola-087226	Oryzias latipes	49.34	1.00e-81	294.00
IUUC-Olu-087893	Ostreococcus lucimarinus	45.39	5.00e-65	238.00
IUUC-Oga-088837	Otolemur garnettii	49.83	4.00e-83	299.00
IUUC-Oar-089594	Ovis aries	49.34	2.00e-82	296.00
IUUC-Ptr-091132	Pan troglodytes	49.50	8.00e-83	298.00
IUUC-Psi-093568	Pelodiscus sinensis	50.51	1.00e-78	283.00
IUUC-Pma-094756	Petromyzon marinus	50.00	1.00e-31	126.00
IUUC-Pno-094955	Phaeosphaeria nodorum	53.72	2.00e-86	309.00
IUUC-Ppa-095835	Physcomitrella patens	50.17	3.00e-76	276.00
IUUC-Pfo-096063	Poecilia formosa	49.34	6.00e-82	295.00
IUUC-Pab-098674	Pongo abelii	49.17	1.00e-81	294.00
IUUC-Pop-099402	Populus trichocarpa	48.32	6.00e-76	275.00
IUUC-Pca-100824	Procavia capensis	52.63	1.00e-57	214.00
IUUC-Ppe-101278	Prunus persica	47.81	3.00e-73	266.00
IUUC-Pva-103161	Pteropus vampyrus	46.36	1.00e-75	274.00
IUUC-Pgr-103573	Puccinia graminis	53.14	2.00e-93	333.00
IUUC-Ptt-103700	Puccinia triticina	53.23	4.00e-90	322.00
IUUC-Pte-104267	Pyrenophora teres	53.54	7.00e-87	311.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	53.20	8.00e-84	301.00
IUUC-Rno-104833	Rattus norvegicus	49.67	4.00e-83	299.00
IUUC-Sce-106437	Saccharomyces cerevisiae	56.57	1.00e-93	334.00
IUUC-Sha-106611	Sarcophilus harrisii	49.50	5.00e-83	298.00
IUUC-Spo-108362	Schizosaccharomyces pombe	79.87	3.00e-146	508.00
IUUC-Smo-108797	Selaginella moellendorffii	51.16	1.00e-77	280.00
IUUC-Sit-110132	Setaria italica	49.01	1.00e-77	280.00
IUUC-Sly-111852	Solanum lycopersicum	48.49	4.00e-74	269.00
IUUC-Stu-112195	Solanum tuberosum	48.49	4.00e-74	269.00
IUUC-Sbi-114229	Sorghum bicolor	48.68	3.00e-77	279.00
IUUC-Sre-114898	Sporisorium reilianum	46.69	7.00e-88	315.00
IUUC-Ssc-115995	Sus scrofa	56.92	6.00e-45	171.00
IUUC-Tgu-116793	Taeniopygia guttata	49.50	4.00e-78	282.00
IUUC-Tru-117797	Takifugu rubripes	49.34	1.00e-81	294.00
IUUC-Tni-120366	Tetraodon nigroviridis	49.34	1.00e-82	297.00
IUUC-Tca-121068	Theobroma cacao	47.78	1.00e-73	267.00
IUUC-Tre-121899	Trichoderma reesei	55.30	6.00e-91	325.00
IUUC-Tvi-122380	Trichoderma virens	55.48	2.00e-91	326.00
IUUC-Tae-125528	Triticum aestivum	48.01	9.00e-77	278.00
IUUC-Tur-126202	Triticum urartu	47.68	2.00e-76	276.00
IUUC-Tme-127181	Tuber melanosporum	55.91	2.00e-98	350.00
IUUC-Ttr-128448	Tursiops truncatus	42.90	4.00e-65	239.00
IUUC-Uma-129661	Ustilago maydis	47.23	1.00e-88	317.00
IUUC-Vda-129666	Verticillium dahliae	56.85	1.00e-88	317.00
IUUC-Vpa-130318	Vicugna pacos	49.83	2.00e-82	296.00
IUUC-Vvi-130868	Vitis vinifera	47.99	2.00e-75	273.00
IUUC-Xtr-131859	Xenopus tropicalis	48.84	6.00e-81	291.00
IUUC-Xma-133898	Xiphophorus maculatus	50.00	4.00e-83	299.00
IUUC-Yli-134559	Yarrowia lipolytica	58.13	6.00e-100	355.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence