iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058261

Ensembl Protein ID

AET00288

UniProt Accession

G7KD13; G7KD13_MEDTR

Genbank Protein ID

AET00288.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g090420

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g090420	AET00288	AET00288

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-28	97.0	518	551
UBD/Beta-Prp	9.70e-48	164.3	251	425

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           gH++ v+c+++   + ++l+s+sdD ti++W l 
   Q: 518  GHSGAVNCVSWnpaNPHMLASASDDRTIRIWGLN 551
           8***********963399*************986 PP

UBD/Beta-Prp

   S: 81   lstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle.tgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgght 180
           l  + +v++l+ h+d+v+ ++fs +g++l+s+s+d+t+ +w++  +g c+++ lsgh++ +++v+++p++  l +++  + +r Wd++tgk+l+  ++   
   Q: 251  LIPSRTVQILETHDDEVWFVQFSHNGKYLASASNDQTAIIWEVGvNGVCVKHRLSGHQKPISSVSWSPNDEELLTCGVEESIRRWDVSTGKCLQIYEK-AG 350
           56678899999999999999999999999999999999999997477888889999999999999999999999999999999999999999999998.77 PP
   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlrsgd 255
               s ++ ++gk+++sg  d+++ +w+l  +e v++++g++   +++++ + ++e ++s  + +++ +++++++d
   Q: 351  AGLVSCTWFPSGKHILSGLSDKSICMWELDGKE-VESWKGQKsLKISDLDITADGEEIISICKPNTVLLFNKETKD 425
           788888888889999999999999999996555.888888772568899999999999999999999999999876 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGGVDDEEPA LKRMKLSAKG LVGLANGSSS KEPVGGFSSD SMARLLPSEG DDQVVGSKGV 60
IKRDEFVRII AKALYSLGYR KSGARLEEES GIPLHSPGVN LFTQQVLDGN WDESVATLRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAAAACAT TAAATATTAT TATATAATAT ACACTTTATC TATATCATTT CATTGGAGAA 60
ATAAGAATAA GGTTTGGGAT TTTCATTTTC ATTCTCAGCG TTTATAGTTT TTGATAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00320--WD40

KEGG

mtr:MTR_5g090420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000905	Aegilops tauschii	61.37	0.00e+00	664.00
IUUC-Atr-002649	Amborella trichopoda	61.68	0.00e+00	711.00
IUUC-Aly-006260	Arabidopsis lyrata	59.29	0.00e+00	663.00
IUUC-Ath-007549	Arabidopsis thaliana	58.81	0.00e+00	656.00
IUUC-Ani-009455	Aspergillus nidulans	32.18	1.00e-71	263.00
IUUC-Ang-009832	Aspergillus niger	31.79	1.00e-76	280.00
IUUC-Bgr-012047	Blumeria graminis	33.98	5.00e-72	265.00
IUUC-Bci-013589	Botrytis cinerea	32.88	5.00e-75	274.00
IUUC-Bdi-014338	Brachypodium distachyon	61.58	0.00e+00	690.00
IUUC-Bol-015855	Brassica oleracea	60.62	0.00e+00	672.00
IUUC-Bra-017245	Brassica rapa	60.59	0.00e+00	669.00
IUUC-Cel-018613	Caenorhabditis elegans	25.50	5.00e-32	132.00
IUUC-Csv-026251	Ciona savignyi	38.00	3.00e-77	281.00
IUUC-Dme-032077	Drosophila melanogaster	35.65	3.00e-88	318.00
IUUC-Fox-037720	Fusarium oxysporum	30.07	6.00e-69	254.00
IUUC-Fso-038206	Fusarium solani	31.75	2.00e-70	259.00
IUUC-Gma-044009	Glycine max	85.89	0.00e+00	981.00
IUUC-Hvu-047610	Hordeum vulgare	61.03	0.00e+00	682.00
IUUC-Lpe-050963	Leersia perrieri	62.05	0.00e+00	706.00
IUUC-Lma-053156	Leptosphaeria maculans	35.75	1.00e-77	283.00
IUUC-Nfi-068498	Neosartorya fischeri	35.34	5.00e-86	311.00
IUUC-Oba-075071	Oryza barthii	63.57	0.00e+00	727.00
IUUC-Obr-076614	Oryza brachyantha	62.74	0.00e+00	710.00
IUUC-Ogl-076963	Oryza glaberrima	65.99	0.00e+00	710.00
IUUC-Ogu-078436	Oryza glumaepatula	65.99	0.00e+00	710.00
IUUC-Oin-080021	Oryza indica	65.99	0.00e+00	711.00
IUUC-Olo-080298	Oryza longistaminata	65.99	0.00e+00	711.00
IUUC-Ome-081202	Oryza meridionalis	63.57	0.00e+00	728.00
IUUC-Oni-082604	Oryza nivara	63.57	0.00e+00	728.00
IUUC-Opu-083763	Oryza punctata	63.40	0.00e+00	728.00
IUUC-Oru-084243	Oryza rufipogon	63.57	0.00e+00	728.00
IUUC-Osa-086153	Oryza sativa	62.50	3.00e-180	624.00
IUUC-Pno-094912	Phaeosphaeria nodorum	34.70	8.00e-78	284.00
IUUC-Pop-099989	Populus trichocarpa	73.32	0.00e+00	857.00
IUUC-Ppe-101227	Prunus persica	61.54	0.00e+00	712.00
IUUC-Ptt-103705	Puccinia triticina	26.67	1.00e-37	150.00
IUUC-Pte-104023	Pyrenophora teres	34.83	3.00e-80	292.00
IUUC-Pyt-104759	Pyrenophora triticirepentis	34.46	4.00e-79	289.00
IUUC-Sce-106152	Saccharomyces cerevisiae	37.40	1.00e-17	84.30
IUUC-Sja-107894	Schizosaccharomyces japonicus	34.98	6.00e-82	297.00
IUUC-Spo-108235	Schizosaccharomyces pombe	34.41	2.00e-80	292.00
IUUC-Sit-110575	Setaria italica	61.90	0.00e+00	724.00
IUUC-Sly-111282	Solanum lycopersicum	63.23	0.00e+00	692.00
IUUC-Sbi-114344	Sorghum bicolor	61.04	0.00e+00	715.00
IUUC-Sre-115051	Sporisorium reilianum	29.48	1.00e-41	164.00
IUUC-Tca-121755	Theobroma cacao	69.31	0.00e+00	808.00
IUUC-Tre-122234	Trichoderma reesei	33.01	2.00e-70	259.00
IUUC-Tae-125635	Triticum aestivum	59.63	0.00e+00	683.00
IUUC-Tur-126726	Triticum urartu	58.36	0.00e+00	673.00
IUUC-Tme-126972	Tuber melanosporum	38.10	2.00e-98	352.00
IUUC-Uma-129354	Ustilago maydis	29.33	5.00e-42	165.00
IUUC-Vvi-130991	Vitis vinifera	60.75	0.00e+00	690.00
IUUC-Yli-134521	Yarrowia lipolytica	35.25	3.00e-78	285.00
IUUC-Zma-135772	Zea mays	62.57	0.00e+00	693.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence