iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131027

UUCD1 version

UUC-ViV-00904

Ensembl Protein ID

VIT_07s0005g04650.t01

UniProt Accession

F6HZS9; F6HZS9_VITVI

Genbank Protein ID

CCB60195.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596502

Gene Name

VIT_07s0005g04650

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0005g04650	VIT_07s0005g04650.t01	VIT_07s0005g04650.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-27	94.7	266	304
UBD/Beta-Prp	2.40e-66	224.5	217	475

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++v+ +a+ +d t+l+++++  ++k+WD+ tg++ ++
   Q: 266  HQNPVSFVAWsPDdTMLLTCGNGEVLKLWDVETGTCKHT 304
           999********777**********************885 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvht 89
           + ++hk+ +  v+fs ++++la++srd   ++w+v +  +    + l++h+++v+ v +spd+ +l+t+++ +++k+wd++tg+c ht
   Q: 217  ILTEHKHEVWFVQFSHNGEYLASSSRDCAAIIWKVLENGVlilRHMLQSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHT 304
           45677788888***********************9766655744556***************************************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshd..rtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           +  h + v s++++p+++++v Gs+d  + i +wd + ++     +  ++  v  ++v pdg  l+s +  + +r+ ++  g+  ++ 
   Q: 305  FGDHGFIVSSCAWFPDSKRIVCGSSDpeKGIYMWDCDGNEIKA-WKGMRMPKVLDLAVTPDGENLISIFSEKEIRILNV--GTNAEHV 389
           *************************944457779999888887.*******************************9987..7777777 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfs...pnderlvsgssDgsiriWdlrsgdllk 258
            +  + s++sls+++++k+l+   +   + +wd+  + e   +++gh++n +++r +    + ++++sgs+   ++iW+  ++++l 
   Q: 390  IS-EDYSITSLSVSRDSKFLIVNLNSEEIHMWDVAgKWEKPLKYTGHKQNKYVIRSCfggFHCTFIASGSENSLVYIWNRGNSTPLE 475
           77.89*****************************986677899************9999999****************988777765 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MENATAMLGP KRLIKKHEFV RIIIQCLHSL GYKNSASCLE SESGISHKSP ESKLLEMQVL 60
NANWEDSIGI LNGIEDLTDE TRASALFLVL QQCLLECLSR GDDSSALTIL RKRVSPLKVG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAATG CGACTGCAAT GCTTGGCCCA AAGCGCCTAA TAAAGAAGCA TGAATTTGTG 60
AGGATTATAA TTCAATGTCT GCATTCACTA GGCTACAAAA ATTCTGCATC CTGTTTGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003020	Amborella trichopoda	54.99	8.00e-159	552.00
IUUC-Aly-005958	Arabidopsis lyrata	64.29	0.00e+00	670.00
IUUC-Ath-006873	Arabidopsis thaliana	65.06	0.00e+00	689.00
IUUC-Ani-009455	Aspergillus nidulans	33.46	1.00e-69	256.00
IUUC-Bgr-012047	Blumeria graminis	32.10	2.00e-67	249.00
IUUC-Bol-015916	Brassica oleracea	64.48	0.00e+00	690.00
IUUC-Bra-017911	Brassica rapa	63.79	0.00e+00	691.00
IUUC-Cel-018613	Caenorhabditis elegans	23.11	1.00e-30	127.00
IUUC-Cho-024572	Choloepus hoffmanni	36.36	6.00e-51	194.00
IUUC-Cin-025474	Ciona intestinalis	39.72	2.00e-49	188.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	31.57	1.00e-67	249.00
IUUC-Cme-027218	Cyanidioschyzon merolae	28.06	9.00e-56	210.00
IUUC-Fox-037720	Fusarium oxysporum	32.75	6.00e-71	260.00
IUUC-Fso-038206	Fusarium solani	30.97	6.00e-70	257.00
IUUC-Gma-043704	Glycine max	71.01	0.00e+00	702.00
IUUC-Mtr-058724	Medicago truncatula	68.43	0.00e+00	721.00
IUUC-Mla-058912	Melampsora laricipopulina	38.12	9.00e-78	283.00
IUUC-Pma-094254	Petromyzon marinus	41.67	2.00e-77	281.00
IUUC-Pop-098968	Populus trichocarpa	79.00	8.00e-173	598.00
IUUC-Ppe-101881	Prunus persica	74.12	0.00e+00	769.00
IUUC-Stu-112587	Solanum tuberosum	66.67	2.00e-165	574.00
IUUC-Sre-115051	Sporisorium reilianum	25.28	2.00e-47	182.00
IUUC-Tre-122234	Trichoderma reesei	33.66	2.00e-71	263.00
IUUC-Tvi-122376	Trichoderma virens	34.38	9.00e-53	199.00
IUUC-Tae-124685	Triticum aestivum	49.80	3.00e-142	497.00
IUUC-Ttr-129184	Tursiops truncatus	34.53	9.00e-73	266.00
IUUC-Vda-129770	Verticillium dahliae	31.18	2.00e-64	239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence