iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cne-027037

Ensembl Protein ID

AAW41915

UniProt Accession

Q5KLV2; Q5KLV2_CRYNJ

Genbank Protein ID

AAW41915.1

Protein Name

WD-repeat protein, putative

Genbank Nucleotide ID

AE017342

Gene Name

CNB03960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CNB03960	AAW41915	AAW41915

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-36	119.6	312	349
UBD/Beta-Prp	5.10e-55	185.1	270	517

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v++++  ++  +++s+s+Dgti++W+ ++g++l
   Q: 312  GHSSRVWSCDSsPSgEMIASSSGDGTIRLWSASKGDCL 349
           8********988666****************9999997 PP

UBD/Beta-Prp

   S: 9    hksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg.d 107
           h + ++cv       +++++gs d t++v ++++g+l + lsgh++ v++++ sp+g++++++s D+ti++w+ s+g+c+ +l g   +v+ +++ p++ d
   Q: 270  HLANVKCVELiGSTAQHVVSGSSDCTLRVVSTEDGSLSHILSGHSSRVWSCDSSPSGEMIASSSGDGTIRLWSASKGDCLGVLVGDGGDVYNVRWRPNReD 370
           55667788885567789********************************************************************************888* PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
            +vs+s dr++r wd+etg+ l+ t+sgh++++  ++++++gn ++sGs+D+ vrlWd   g +  t+t    + + s++fd +gk+l+ g +d++ +lwd
   Q: 371  QVVSASYDRILRSWDIETGKQLR-TFSGHSQSTLAIAYDSTGNTIASGSKDKHVRLWDAVGGVCTNTMTD-CLGEISSVEFDNEGKYLLVGCKDNSNRLWD 469
           ***********************.********************************************98.****************************** PP
   S: 209  lqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsg 254
           l+ ++ v++++gh+    + v++  +   + +++sgs+Dgs++iWd + g
   Q: 470  LRMQRSVYRYTGHQntskNLVRCSFA-CSTSLVISGSEDGSVYIWDRE-G 517
           *************9544444444444.4999**************843.3 PP

Organism

Cryptococcus neoformans

Protein Sequence
(Fasta)

MSSGGHTNAA GPSRQHSLTA ESRSLTTARQ KEKAPQLEDV VLEEGLFEQE IDLLIGQYLE 60
ARGASKAARI WDEQILGRSA NGSTRKEHIE DVERAILDGD WGSIENLVAR PGLLRIQTQK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAGTTCTC GACGTGATCG GCTAAACGAA AGAGATAACA GACGTCCTTT GGCTTTATCT 60
TCGACATTCA CTTACCAGTT GAGCGATTTG AAGTGATACG GACACCTGCA ACTCCAATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

cne:CNB03960

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cme-027305	Cyanidioschyzon merolae	35.63	1.00e-84	305.00
IUUC-Mvi-060323	Microbotryum violaceum	43.79	2.00e-113	400.00
IUUC-Ppa-095497	Physcomitrella patens	41.13	1.00e-98	352.00
IUUC-Sly-111880	Solanum lycopersicum	32.21	2.00e-33	134.00
IUUC-Stu-112051	Solanum tuberosum	32.21	1.00e-33	134.00
IUUC-Sre-114914	Sporisorium reilianum	41.03	2.00e-103	368.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence