iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087129

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Coronin

Genbank Nucleotide ID

BAAF04045435

Gene Name

coro1a; LOC101170433

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000002046.1	ENSORLT00000002553.1	ENSORLP00000002552.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-19	67.1	79	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gHt++v +++f   +d++++sGs D+++++W++ +g l
   Q: 79   GHTGPVLDIEFcphNDNIIASGSEDCSVMIWEIPEGGL 116
           8***********9877****************887765 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSRKVVRTSK FRHVFGQAVK ADQCYDDIRI SQMTWDSNFC SVNPKFVAMI VDASGGGAFI 60
VLPLNKTGRI DMSYPTVCGH TGPVLDIEFC PHNDNIIASG SEDCSVMIWE IPEGGLTTSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCACTTTGT GATGTACATT AAGCCGCCGT CTCCTGTGAG CCGTCACTCT GGTTGGCAGG 60
GTGTTGGGTG AACTCCTGAA TCTCCTCCGG CTGCCTTCGA CCCTGAAGCT CCCCAGGTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029508--CORO1A
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0007420--P:brain development
GO:0021952--P:central nervous system projection neuron axonogenesis
GO:0001654--P:eye development
GO:0030595--P:leukocyte chemotaxis
GO:0001845--P:phagolysosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011101	Astyanax mexicanus	83.65	0.00e+00	827.00
IUUC-Csv-026184	Ciona savignyi	43.50	4.00e-89	321.00
IUUC-Dre-028167	Danio rerio	81.74	0.00e+00	798.00
IUUC-Gmo-039519	Gadus morhua	78.56	0.00e+00	798.00
IUUC-Gac-042545	Gasterosteus aculeatus	84.50	0.00e+00	842.00
IUUC-Lch-050582	Latimeria chalumnae	67.94	0.00e+00	694.00
IUUC-Ont-072391	Oreochromis niloticus	87.66	0.00e+00	860.00
IUUC-Pfo-096735	Poecilia formosa	85.77	0.00e+00	853.00
IUUC-Sre-114911	Sporisorium reilianum	36.54	3.00e-79	289.00
IUUC-Tru-117655	Takifugu rubripes	85.11	0.00e+00	844.00
IUUC-Tni-120773	Tetraodon nigroviridis	83.40	0.00e+00	804.00
IUUC-Uma-129489	Ustilago maydis	37.20	3.00e-82	299.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence