iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012872

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02067124

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000002615.4	ENSBTAT00000003384.4	ENSBTAP00000003384.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-11	43.9	464	531
E3 activity/RING/RING	3.20e-08	34.1	467	505

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl....teedlvPnltlrrliqawc 69
           ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++  l    ++++   n  + +li +++
   Q: 464  DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAK-CPLCKDGLsqclASRKYSKNVIMEELIAKFL 531
           678*********************************9.****876633336777788888888887776 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f + p+++pCgH+f+++Cl++          +++CPlC+
   Q: 467  CSLCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNAKCPLCK 505
           ****999977.***************999......9*********7 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MDSFQAGQML SLPAELGSNN LELEEPAASA ARGDTGPHPE AAAEGPAPLP TRPPEQEQPP 60
RASTPECKVL LTQADALASG GRLREALEVY RQLSERQQLV AEQLEQLVRC LAENVPQAEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCAT TTCAGGCTGG ACAGATGCTG AGCTTGCCCG CCGAGCTCGG CAGCAACAAC 60
TTAGAGCTGG AGGAACCGGC AGCATCAGCG GCCCGCGGAG ACACGGGCCC CCACCCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0005622--C:intracellular
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

bta:508189

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000755	Aegilops tauschii	29.47	6.00e-11	62.00
IUUC-Aml-001774	Ailuropoda melanoleuca	79.27	0.00e+00	1043.00
IUUC-Apl-003916	Anas platyrhynchos	61.35	0.00e+00	637.00
IUUC-Aca-004822	Anolis carolinensis	48.09	2.00e-168	585.00
IUUC-Ago-007876	Ashbya gossypii	37.84	2.00e-09	56.60
IUUC-Ani-009473	Aspergillus nidulans	31.25	7.00e-42	165.00
IUUC-Ame-010881	Astyanax mexicanus	50.51	2.00e-178	619.00
IUUC-Cel-018356	Caenorhabditis elegans	30.12	5.00e-10	57.00
IUUC-Cja-018747	Callithrix jacchus	80.08	0.00e+00	1035.00
IUUC-Cfa-020101	Canis familiaris	86.18	0.00e+00	1148.00
IUUC-Cpo-022041	Cavia porcellus	77.89	0.00e+00	1017.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	32.00	2.00e-09	55.80
IUUC-Csa-024034	Chlorocebus sabaeus	87.37	0.00e+00	1203.00
IUUC-Cin-025668	Ciona intestinalis	31.75	3.00e-80	292.00
IUUC-Csv-026364	Ciona savignyi	46.03	2.00e-79	289.00
IUUC-Dre-028400	Danio rerio	51.52	8.00e-144	503.00
IUUC-Dno-029518	Dasypus novemcinctus	79.79	0.00e+00	1058.00
IUUC-Dor-031132	Dipodomys ordii	71.30	0.00e+00	1014.00
IUUC-Dse-031331	Dothistroma septosporum	31.99	6.00e-39	155.00
IUUC-Eca-033382	Equus caballus	91.83	0.00e+00	1269.00
IUUC-Fca-035777	Felis catus	78.53	0.00e+00	735.00
IUUC-Fal-036730	Ficedula albicollis	62.19	0.00e+00	657.00
IUUC-Fso-038334	Fusarium solani	40.89	3.00e-39	156.00
IUUC-Gmo-039110	Gadus morhua	49.57	2.00e-178	618.00
IUUC-Gga-041187	Gallus gallus	57.98	0.00e+00	825.00
IUUC-Gac-042201	Gasterosteus aculeatus	51.34	0.00e+00	657.00
IUUC-Ggo-045111	Gorilla gorilla	87.24	0.00e+00	1196.00
IUUC-Hsa-045695	Homo sapiens	87.24	0.00e+00	1194.00
IUUC-Itr-048224	Ictidomys tridecemlineatus	48.25	1.00e-126	446.00
IUUC-Lch-050429	Latimeria chalumnae	53.60	0.00e+00	748.00
IUUC-Loc-051823	Lepisosteus oculatus	53.36	0.00e+00	670.00
IUUC-Lma-053145	Leptosphaeria maculans	31.58	3.00e-41	163.00
IUUC-Laf-053434	Loxodonta africana	87.27	0.00e+00	896.00
IUUC-Mcc-055249	Macaca mulatta	79.96	0.00e+00	753.00
IUUC-Mga-060131	Meleagris gallopavo	62.58	1.00e-180	625.00
IUUC-Mmr-060749	Microcebus murinus	88.48	0.00e+00	1234.00
IUUC-Mdo-062261	Monodelphis domestica	56.55	0.00e+00	749.00
IUUC-Mmu-063219	Mus musculus	80.52	0.00e+00	1091.00
IUUC-Mpu-066222	Mustela putorius furo	79.42	0.00e+00	1030.00
IUUC-Mlu-067769	Myotis lucifugus	83.82	0.00e+00	1127.00
IUUC-Nle-069738	Nomascus leucogenys	89.37	0.00e+00	958.00
IUUC-Ont-072029	Oreochromis niloticus	57.28	3.00e-175	608.00
IUUC-Oan-073179	Ornithorhynchus anatinus	80.81	7.00e-170	590.00
IUUC-Ocu-074884	Oryctolagus cuniculus	83.36	0.00e+00	1101.00
IUUC-Ogl-077658	Oryza glaberrima	32.98	1.00e-11	63.90
IUUC-Ome-081482	Oryza meridionalis	32.98	2.00e-11	63.20
IUUC-Osa-085978	Oryza sativa	32.98	1.00e-11	63.90
IUUC-Ola-086698	Oryzias latipes	49.02	0.00e+00	630.00
IUUC-Oga-089109	Otolemur garnettii	84.33	0.00e+00	1143.00
IUUC-Oar-089903	Ovis aries	98.16	0.00e+00	1323.00
IUUC-Ptr-091238	Pan troglodytes	86.69	0.00e+00	1185.00
IUUC-Pan-092379	Papio anubis	81.90	0.00e+00	1185.00
IUUC-Psi-093418	Pelodiscus sinensis	60.40	0.00e+00	684.00
IUUC-Pma-094231	Petromyzon marinus	63.24	3.00e-109	387.00
IUUC-Pno-094889	Phaeosphaeria nodorum	39.62	5.00e-42	165.00
IUUC-Pfo-097284	Poecilia formosa	48.65	2.00e-180	626.00
IUUC-Pab-098343	Pongo abelii	81.28	0.00e+00	1165.00
IUUC-Pca-100905	Procavia capensis	82.22	0.00e+00	1006.00
IUUC-Pva-102242	Pteropus vampyrus	84.23	0.00e+00	1153.00
IUUC-Ptt-103898	Puccinia triticina	26.87	1.00e-29	124.00
IUUC-Pte-104214	Pyrenophora teres	32.24	1.00e-39	157.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	32.54	1.00e-39	157.00
IUUC-Rno-105899	Rattus norvegicus	76.87	0.00e+00	1097.00
IUUC-Sha-107565	Sarcophilus harrisii	51.86	0.00e+00	692.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	36.89	8.00e-31	128.00
IUUC-Spo-108344	Schizosaccharomyces pombe	34.36	3.00e-24	106.00
IUUC-Sar-112999	Sorex araneus	61.87	0.00e+00	662.00
IUUC-Sre-114977	Sporisorium reilianum	33.33	1.00e-36	149.00
IUUC-Ssc-115705	Sus scrofa	92.89	0.00e+00	1266.00
IUUC-Tgu-116978	Taeniopygia guttata	65.23	0.00e+00	798.00
IUUC-Tru-118016	Takifugu rubripes	43.91	1.00e-155	543.00
IUUC-Tsy-118988	Tarsius syrichta	91.00	0.00e+00	924.00
IUUC-Tni-119913	Tetraodon nigroviridis	46.15	2.00e-161	562.00
IUUC-Tbe-127563	Tupaia belangeri	70.76	1.00e-141	496.00
IUUC-Ttr-128875	Tursiops truncatus	90.91	0.00e+00	1159.00
IUUC-Uma-129541	Ustilago maydis	46.40	9.00e-30	126.00
IUUC-Vpa-130779	Vicugna pacos	97.91	2.00e-162	565.00
IUUC-Xtr-132508	Xenopus tropicalis	52.64	0.00e+00	719.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence