iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109501

UUCD1 version

UUC-SeM-00009

Ensembl Protein ID

EFJ38729

UniProt Accession

D8QNA9; D8QNA9_SELML

Genbank Protein ID

EFJ31413.1; EFJ38729.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377573; GL377565

Gene Name

SELMODRAFT_65861; SELMODRAFT_65866

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_65861	EFJ38729	EFJ38729

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-09	36.7	235	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCledf   ++++ lpC H fh dC+  w       + + +CP Cr
   Q: 235  CSICLEDFtvGTEVRGLPCAHNFHVDCIDEW------LRLNVKCPQCR 276
           ********88555999***************......**********8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MGARGVDFKW FDGFFLSMLA TSVIVVSINW DRYHACMYPL HIWIVVDYAT VFVFRILMFV 60
DNGIASKMGP DASPQQRLLL FQARVLVLSC LAFFMYPFLW AWTVIGSLWF TNARQCLPEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCTC GCGGCGTGGA TTTCAAGTGG TAAGTGCTGC TTCCTCTTTC TCGCGCATTC 60
GCTCACCGCA GAGAGAACTA TTTCTCGCAG GTTCGATGGA TTTTTCTTGT CAATGCTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_65861; smo:SELMODRAFT_65866

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	66.32	2.00e-112	399.00
IUUC-Atr-002648	Amborella trichopoda	68.84	4.00e-117	413.00
IUUC-Aly-006490	Arabidopsis lyrata	65.08	4.00e-111	393.00
IUUC-Ath-007655	Arabidopsis thaliana	65.08	1.00e-111	395.00
IUUC-Bdi-014759	Brachypodium distachyon	67.37	3.00e-105	374.00
IUUC-Bol-015136	Brassica oleracea	64.86	7.00e-111	392.00
IUUC-Bra-018024	Brassica rapa	60.40	4.00e-102	363.00
IUUC-Gma-042879	Glycine max	68.47	2.00e-120	424.00
IUUC-Hvu-047589	Hordeum vulgare	72.11	7.00e-58	214.00
IUUC-Lpe-051403	Leersia perrieri	54.51	2.00e-66	244.00
IUUC-Mtr-058746	Medicago truncatula	68.49	3.00e-121	427.00
IUUC-Mac-064833	Musa acuminata	66.78	9.00e-116	409.00
IUUC-Oba-075099	Oryza barthii	66.21	9.00e-113	399.00
IUUC-Obr-076541	Oryza brachyantha	65.86	1.00e-112	398.00
IUUC-Ogl-077544	Oryza glaberrima	66.21	1.00e-112	399.00
IUUC-Ogu-078123	Oryza glumaepatula	63.10	1.00e-104	372.00
IUUC-Oin-079313	Oryza indica	65.71	2.00e-107	381.00
IUUC-Olo-080383	Oryza longistaminata	46.44	1.00e-65	242.00
IUUC-Ome-081106	Oryza meridionalis	57.68	5.00e-84	303.00
IUUC-Oni-082730	Oryza nivara	66.21	6.00e-113	399.00
IUUC-Opu-083224	Oryza punctata	66.21	5.00e-113	400.00
IUUC-Oru-085150	Oryza rufipogon	63.93	4.00e-89	320.00
IUUC-Osa-086306	Oryza sativa	66.21	8.00e-113	399.00
IUUC-Ppa-095217	Physcomitrella patens	55.47	6.00e-81	293.00
IUUC-Pop-099421	Populus trichocarpa	69.61	9.00e-114	402.00
IUUC-Ppe-101399	Prunus persica	65.59	4.00e-90	323.00
IUUC-Ptt-103976	Puccinia triticina	42.11	1.00e-11	62.40
IUUC-Sit-109685	Setaria italica	66.55	1.00e-112	399.00
IUUC-Sly-111388	Solanum lycopersicum	67.60	1.00e-117	415.00
IUUC-Stu-112821	Solanum tuberosum	67.60	2.00e-118	418.00
IUUC-Sbi-114646	Sorghum bicolor	66.90	3.00e-112	397.00
IUUC-Tca-121643	Theobroma cacao	69.18	2.00e-117	414.00
IUUC-Tvi-122495	Trichoderma virens	57.69	5.00e-12	65.10
IUUC-Tae-123724	Triticum aestivum	67.02	2.00e-111	394.00
IUUC-Tur-126639	Triticum urartu	63.97	3.00e-89	322.00
IUUC-Vvi-131627	Vitis vinifera	58.21	3.00e-108	384.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence