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Tag Content
iUUCD ID IUUC-Mtr-058339
Ensembl Protein ID KEH38924
UniProt Accession A0A072VA81; A0A072VA81_MEDTR
Genbank Protein ID KEH38924.1
Protein Name DNA-binding and zinc-finger protein
Genbank Nucleotide ID CM001218
Gene Name MTR_2g084620
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
MTR_2g084620 KEH38924 KEH38924
MTR_2g084620 KEH38925 KEH38925
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 9.40e-09 36.8 1263 1312
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
    vC++C+++++++ + + Ce C++w+H++ l+l+ e++ + + C +Cr+
   Q: 1263 VCHLCHKPYRSDLMYIGCESCTRWYHAEALELE-ESKIFSMLGFKCCRCRK 1312
    8*********999********************.888888878******85 PP
   

Organism Medicago truncatula
Protein Sequence
(Fasta)
MKLPRKSKST EPPPPPMAPP SGDPPSEPPK RRGRPRKQRR KEKETVTVEL KKPIVLIGRY 60
VLKEFSERVD QIGKVLSYKI GLYRVDYENG DFEDLDSSAI RRILIEDCDF DDDLIRRKNE 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mtr-058339|E3,PHD|Medicago truncatula
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Nucleotide Sequence
(Fasta)
TTCAAACCCT AACAATTTTC ACTGAACCTC CGCAATTAGA AACCCTAACT CTCTTCATCT 60
TCAATGAAGC TTCCGCGAAA ATCCAAATCA ACCGAACCAC CACCACCACC GATGGCGCCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mtr-058339|E3,PHD|Medicago truncatula
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

KEGG mtr:MTR_2g084620
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000221 Aegilops tauschii 34.88 1.00e-117 417.00
IUUC-Atr-002497 Amborella trichopoda 35.98 3.00e-109 390.00
IUUC-Aly-006239 Arabidopsis lyrata 42.63 0.00e+00 975.00
IUUC-Ath-007124 Arabidopsis thaliana 43.71 0.00e+00 1004.00
IUUC-Bol-016146 Brassica oleracea 42.09 0.00e+00 1026.00
IUUC-Bra-017694 Brassica rapa 42.50 0.00e+00 1016.00
IUUC-Gma-043978 Glycine max 63.20 0.00e+00 1652.00
IUUC-Mac-065252 Musa acuminata 42.76 3.00e-147 516.00
IUUC-Oba-075125 Oryza barthii 35.36 4.00e-115 409.00
IUUC-Obr-076575 Oryza brachyantha 35.40 3.00e-106 380.00
IUUC-Ogl-077936 Oryza glaberrima 35.32 2.00e-115 410.00
IUUC-Ogu-078676 Oryza glumaepatula 35.81 2.00e-116 414.00
IUUC-Sbi-114633 Sorghum bicolor 35.23 7.00e-105 375.00
IUUC-Tca-121553 Theobroma cacao 46.94 0.00e+00 665.00
IUUC-Tae-125366 Triticum aestivum 29.98 2.00e-104 374.00
Created Date 25-Jun-2017

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