PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants Q84ME1 Q9SLE4 two hybrid 21798944 direct interaction X 2 Q9SW27 Q9SLE4 two hybrid 21345795 direct interaction X 2 Q9SLE4 F4JAP8 two hybrid 21798944 direct interaction X 2 Q9SLE4 Q8VYL4 two hybrid 21798944 direct interaction X 2 Q9LN67 Q9SLE4 two hybrid 21798944 direct interaction X 2 O82239 Q9SLE4 two hybrid 21798944 direct interaction X 2 Q9LSA6 Q9SLE4 two hybrid 21798944 direct interaction X 2 P93030 Q9SLE4 two hybrid 21798944 direct interaction X 2 Q9SLE4 Q9LSD8 two hybrid 21345795 direct interaction X 2 Q9SLE4 Q8GWJ6 two hybrid 21345795 direct interaction X 2 Q9SLE4 Q8LPN7 two hybrid 21798944 direct interaction X 2 Q9SLE4 Q94AB7 two hybrid 21798944 direct interaction X 2 Q9M0T4 Q9SLE4 two hybrid 21798944 direct interaction X 2 Q84ME1 Q9SLE4 two hybrid array 21798944 physical association X 2 Q8W4A3 Q9SLE4 two hybrid array 21798944 physical association X 2 Q9SLE4 Q8VYL4 two hybrid array 21798944 physical association X 2 Q9LN67 Q9SLE4 two hybrid array 21798944 physical association X 2 O82239 Q9SLE4 two hybrid array 21798944 physical association X 2 Q9LSA6 Q9SLE4 two hybrid array 21798944 physical association X 2 P93030 Q9SLE4 two hybrid array 21798944 physical association X 2 Q9SLE4 Q8LPN7 two hybrid array 21798944 physical association X 2 Q9SLE4 Q94AB7 two hybrid array 21798944 physical association X 2 Q9M0T4 Q9SLE4 two hybrid array 21798944 physical association X 2

PPI - PINA Gene A Gene B Method Publications Species A Species B Interaction Type Source Database Interaction Identidiers Experimental Role(s) Interactor A Experimental Role(s) Interactor B At3g60300/F27H5_90 UBC29 MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_5495 prey bait LUL3 UBC29 MI:0018(two hybrid)|MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_9797|UniProt_5492 prey|prey bait|bait RFI2 UBC29 MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_5490 prey bait At2g37150 UBC29 MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_5494 prey bait UBC29 MUB3 MI:0018(two hybrid) 21345795 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_6578 prey bait At5g41350 UBC29 MI:0018(two hybrid)|MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_12241|UniProt_5496 prey|prey bait|bait At3g19950 UBC29 MI:0018(two hybrid)|MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_9799|UniProt_5493 prey|prey bait|bait At1g19310 UBC29 MI:0018(two hybrid)|MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_12240|UniProt_5497 bait|prey prey|bait At3g60300 UBC29 MI:0018(two hybrid) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_10974 prey bait AT4g08460 UBC29 MI:0018(two hybrid)|MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_11488|UniProt_5499 prey|prey bait|bait PUB29 UBC29 MI:0397(two hybrid array)|MI:0018(two hybrid) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0407(direct interaction) (intact)|(biogrid) UniProt_5498|BIOGRID_10367 prey|prey bait|bait RMA2 UBC29 MI:0397(two hybrid array)|MI:0018(two hybrid) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0407(direct interaction) (intact)|(biogrid) UniProt_5491|BIOGRID_12242 prey|prey bait|bait MUB6 UBC29 MI:0018(two hybrid) 21345795 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_6596 bait prey MUB4 UBC29 MI:0018(two hybrid) 21345795 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_6585 bait prey

PPI - HINT Gene A Gene B PMID Method Quality F4JAP8 UBC29 21798944 0018 HT RFI2 UBC29 21798944,21798944 0018,0397 HT ARP2 UBC29 21345795 0018 LC RMA2 UBC29 21798944,21798944 0018,0397 HT LUL3 UBC29 21798944,21798944 0018,0397 HT MUB6 UBC29 21345795 0018 LC Q8LPN7 UBC29 21798944,21798944 0018,0397 HT Q8VYL4 UBC29 21798944,21798944 0018,0397 HT Q8W4A3 UBC29 21798944 0397 HT Q94AB7 UBC29 21798944,21798944 0018,0397 HT Q9LN67 UBC29 21798944,21798944 0018,0397 HT PUB29 UBC29 21798944,21798944 0018,0397 HT Q9M0T4 UBC29 21798944,21798944 0018,0397 HT UBC29 MUB3 21345795 0018 LC

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q9SLE4 Q8GWJ6 UBC29 MUB6 0.309 21345795 Q9SLE4 Q9LN67 UBC29 Q9LN67 0.126 21798944 Q9SLE4 Q9LSD8 UBC29 MUB4 0.309 21345795 Q9SLE4 Q84ME1 UBC29 LUL3 0.286 21798944 Q9SLE4 Q9LSA6 UBC29 PUB29 0.286 21798944 Q9SLE4 Q94AB7 UBC29 Q94AB7 0.126 21798944 Q9SW27 Q9SLE4 MUB3 UBC29 0.309 21345795 Q9SLE4 P93030 UBC29 RMA2 0.286 21798944 Q9SLE4 Q9M0T4 UBC29 Q9M0T4 0.126 21798944 Q9SLE4 O82239 UBC29 RFI2 0.126 21798944 Q9SLE4 Q8VYL4 UBC29 Q8VYL4 0.126 21798944 Q9SLE4 Q8LPN7 UBC29 Q8LPN7 0.286 21798944 Q9SLE4 Q8W4A3 UBC29 Q8W4A3 0.126 21798944