PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants Q9SJN0 Q8L4M1 affinity chromatography technology 20525848 physical association X 2 B3H6I9 Q8L4M1 two hybrid 18223036 direct interaction X 2 B3H6I9 Q8L4M1 two hybrid 20525848 direct interaction X 2 Q38845 Q8L4M1 two hybrid 21798944 direct interaction X 2 Q8LGH4 Q8L4M1 affinity chromatography technology 20525848 physical association X 2 Q6NPN9 Q8L4M1 two hybrid 20525848 direct interaction X 2 Q6NPN9 Q8L4M1 affinity chromatography technology 20525848 physical association X 2 Q6NPN9 Q8L4M1 pull down 20525848 direct interaction X 2 Q6NPN9 Q8L4M1 protein complementation assay 20525848 direct interaction X 2 Q8L4M1 affinity chromatography technology 20634427 physical association X 2 Q9C9L2 Q8L4M1 two hybrid 21798944 direct interaction X 2 F4K4J0 Q8L4M1 two hybrid 21798944 direct interaction X 2 O49552 Q8L4M1 affinity chromatography technology 18223036 physical association X 2 O49552 Q8L4M1 affinity chromatography technology 20525848 physical association X 2 Q8L4M1 anti tag coimmunoprecipitation 16705748 association C 8 Q8L4M1 anti tag coimmunoprecipitation 16705748 association C 10 Q38845 Q8L4M1 two hybrid array 21798944 physical association X 2 Q9C9L2 Q8L4M1 two hybrid array 21798944 physical association X 2 F4K4J0 Q8L4M1 two hybrid array 21798944 physical association X 2 Q9M0V3 Q8L4M1 two hybrid 18223036 physical association X 2 Q9M0V3 Q8L4M1 anti tag coimmunoprecipitation 18223036 physical association X 2

PPI - PINA Gene A Gene B Method Publications Species A Species B Interaction Type Source Database Interaction Identidiers Experimental Role(s) Interactor A Experimental Role(s) Interactor B PP2AA1 DWA1 MI:0018(two hybrid)|MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_11194|UniProt_5810 bait|prey prey|bait DWA1 THO5 MI:0018(two hybrid) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_11527 bait prey DWA2 DWA1 MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0018(two hybrid) 20525848 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association)|MI:0407(direct interaction)|MI:0407(direct interaction) (biogrid)|(biogrid)|(biogrid)|(biogrid) BIOGRID_4832|BIOGRID_4830|BIOGRID_4831|BIOGRID_4829 bait|prey|bait|prey prey|bait|prey|bait DWA1 CUL4 MI:0018(two hybrid) 20525848 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (biogrid) BIOGRID_4822 bait prey DWA1 ABI5 MI:0018(two hybrid) 20525848 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (biogrid) BIOGRID_4826 bait prey DWA1 TCP15 MI:0018(two hybrid)|MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_11478|UniProt_5812 prey|bait bait|prey DWA1 THO3 MI:0004(affinity chromatography technology) 20634427 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (biogrid) BIOGRID_4870 prey bait DDB1B DWA1 MI:0018(two hybrid)|MI:0018(two hybrid) 18223036,20525848 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association) (biogrid)|(biogrid) BIOGRID_4824|BIOGRID_2871 prey|bait bait|prey DWA1 THO5B MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_5811 bait prey DWA1 DDB1A MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0018(two hybrid) 18223036,20525848 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association)|MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact)|(biogrid)|(intact) BIOGRID_2850|UniProt_15347|BIOGRID_4819|UniProt_15328 prey|prey|prey|prey bait|bait|bait|bait

PPI - HINT Gene A Gene B PMID Method Quality THO5B THO6 21798944,21798944 0018,0397 HT PP2AA1 THO6 21798944,21798944 0018,0397 HT DWA2 THO6 20525848,20525848,20525848,20525848 0018,0090,0004,0096 LC THO6 TCP15 21798944,21798944 0018,0397 HT THO6 DDB1A 20525848,18223036,18223036 0018,0007,0018 LC DDB1B THO6 18223036,20525848 0004,0004 LC DWA2 THO6 20525848,20525848,20525848,20525848 0018,0090,0004,0096 LC THO6 CUL4 20525848 0004 LC THO6 THO3 20634427 0004 LC THO6 DDB1A 18223036,18223036 0007,0018 LC THO6 ABI5 20525848 0004 LC

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q8L4M1 O49552 THO6 DDB1B 0.376 18223036,20525848 Q8LGH4 Q8L4M1 CUL4 THO6 0.21 20525848 Q9SJN0 Q8L4M1 ABI5 THO6 0.21 20525848 Q9FKT5 Q8L4M1 THO3 THO6 0.21 20634427 Q9M0V3 Q8L4M1 DDB1A THO6 0.74 18223036,20525848 Q8L4M1 Q6NPN9 THO6 DWA2 0.74 20525848 Q8L4M1 P30733 THO6 PHYA 0.21 16705748 Q9C9L2 Q8L4M1 TCP15 THO6 0.286 21798944 Q8L4M1 P34094 THO6 PHYB 0.21 16705748 Q8L4M1 F4K4J0 THO6 THO5B 0.286 21798944 Q8L4M1 Q38845 THO6 PP2AA1 0.286 21798944