PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants O49484 Q9SKK0 - 14749489 - X 2 Q9SKK0 O65674 - 14749489 - X 2 Q9SKK0 Q9FHW7 - 14749489 - X 2 Q9SKK0 Q39255 - 14749489 - X 2 O49484 Q9SKK0 two hybrid 23166809 direct interaction X 2 O49484 Q9SKK0 two hybrid 14749489 direct interaction X 2 O49484 Q9SKK0 two hybrid 14749489 direct interaction X 2 Q9SKK0 Q9LNT9 two hybrid 23166809 direct interaction X 2 Q9SKK0 O65674 two hybrid 23166809 direct interaction X 2 Q9SKK0 O65674 two hybrid 14749489 direct interaction X 2 Q9SKK0 O65674 two hybrid 14749489 direct interaction X 2 B9DGE3 Q9SKK0 pull down 14675533 direct interaction X 2 Q9SKK0 Q39255 two hybrid 23166809 direct interaction X 2 Q9SKK0 Q9FHW7 two hybrid 23166809 direct interaction X 2 Q9SKK0 O81057 two hybrid 23166809 direct interaction X 2 Q9SKK0 two hybrid 23166809 direct interaction X 2 Q9SKK0 Q39255 two hybrid 14749489 direct interaction X 2 Q9SKK0 Q9FHW7 two hybrid 14749489 direct interaction X 2 Q9SKK0 Q9SLH0 two hybrid 14675533 direct interaction X 2 Q9SKK0 Q39255 two hybrid 14675533 direct interaction X 2 Q9SKK0 Q9FHW7 two hybrid 14675533 direct interaction X 2 Q9SKK0 Q39255 pull down 14675533 direct interaction X 2 Q9SKK0 F4J0D8 two hybrid 21798944 direct interaction X 2 Q9SKK0 Q9FHW7 two hybrid 21798944 direct interaction X 2 Q9SKK0 Q9C553 two hybrid 21798944 direct interaction X 2 Q9M1X5 Q9SKK0 two hybrid 23166809 direct interaction X 2 O24606 Q9SKK0 two hybrid 14675533 direct interaction X 2 O24606 Q9SKK0 pull down 14675533 direct interaction X 2 O24606 Q9SKK0 two hybrid 15090654 direct interaction X 2 O24606 Q9SKK0 MI:0809,(-) 21737749 physical association X 2 O49484 Q9SKK0 two hybrid 12169662 physical association X 2 O49484 Q9SKK0 two hybrid 14749489 physical association X 2 O49484 Q9SKK0 two hybrid 14749489 physical association X 2 Q9SKK0 O65674 two hybrid 14749489 physical association X 2 Q9SKK0 O65674 two hybrid 14749489 physical association X 2 Q9SKK0 Q945P2 two hybrid array 21798944 physical association X 2 Q9LHA4 Q9SKK0 two hybrid array 21798944 physical association X 2 Q9SY65 Q9SKK0 two hybrid 12169662 physical association X 2 B9DGE3 Q9SKK0 pull down 14675533 physical association X 2 Q9SKK0 Q39255 two hybrid 12169662 physical association X 2 Q9SKK0 Q9FHW7 two hybrid 12169662 physical association X 2 Q9SKK0 P43291 two hybrid 14675532 physical association X 2 Q9SKK0 Q39255 two hybrid 14675533 physical association X 2 Q9SKK0 P43291 pull down 14675533 physical association X 2 Q9SKK0 Q9FHW7 two hybrid 14675533 physical association X 2 Q9SKK0 Q9SLH0 two hybrid 14675533 physical association X 2 Q9SKK0 Q9FHW7 two hybrid 14749489 physical association X 2 Q9SKK0 Q39255 two hybrid 14749489 physical association X 2 Q9SKK0 Q9FHW7 pull down 21798944 direct interaction X 2 Q9SKK0 Q39255 pull down 21798944 direct interaction X 2 Q9SKK0 Q9C553 two hybrid array 21798944 physical association X 2 Q9SKK0 Q9FHW7 two hybrid array 21798944 physical association X 2 Q9M1X5 Q9SKK0 two hybrid 12169662 physical association X 2 O24606 Q9SKK0 two hybrid 14675532 physical association X 2 O24606 Q9SKK0 pull down 14675533 physical association X 2 O24606 Q9SKK0 two hybrid 14675533 physical association X 2

PPI - PINA Gene A Gene B Method Publications Species A Species B Interaction Type Source Database Interaction Identidiers Experimental Role(s) Interactor A Experimental Role(s) Interactor B At5g49210 EBF1 MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_6899 bait prey SKP1A EBF1 MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0397(two hybrid array)|MI:0018(two hybrid) 12169662,14675533,14749489,21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association)|MI:0407(direct interaction)|MI:0915(physical association) (intact)|(intact)|(intact)|(intact) UniProt_17590|UniProt_17382|UniProt_8756|UniProt_17768 prey|prey|prey|prey bait|bait|bait|bait VHA-D2 EBF1 MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_4293 bait prey SKP1B EBF1 MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0397(two hybrid array)|MI:0397(two hybrid array) 12169662,14675533,14749489,21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association)|MI:0915(physical association)|MI:0915(physical association)|MI:0407(direct interaction) (intact)|(intact)|(intact)|(intact)|(intact) UniProt_17591|UniProt_17383|UniProt_17769|UniProt_3784|UniProt_8739 prey|prey|prey|bait|prey bait|bait|bait|prey|bait EBF1 ASK18 MI:0018(two hybrid) 12169662 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_17594 bait prey F5D21.23 EBF1 MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_7365 bait prey ASK13 EBF1 MI:0018(two hybrid) 12169662 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_17593 prey bait SRK2A EBF1 MI:0018(two hybrid)|MI:0018(two hybrid) 14675532,14675533 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association) (intact)|(intact) UniProt_17778|UniProt_16014 prey|prey bait|bait CUL1 EBF1 MI:0018(two hybrid) 14675533 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_17781 prey bait ASK11 EBF1 MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0018(two hybrid) 12169662,14749489 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association)|MI:0915(physical association) (intact)|(intact)|(intact) UniProt_17384|UniProt_17592|UniProt_17417 prey|prey|bait bait|bait|prey EBF1 EIL1 MI:0018(two hybrid) 14675533 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_17771 bait prey EIN3 EBF1 MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0018(two hybrid) 14675532,14675533 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association)|MI:0915(physical association) (intact)|(intact)|(intact) UniProt_16012|UniProt_17776|UniProt_17770 bait|prey|prey prey|bait|bait ASK12 EBF1 MI:0018(two hybrid)|MI:0018(two hybrid) 14749489 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association) (intact)|(intact) UniProt_17385|UniProt_17418 prey|bait bait|prey

PPI - HINT Gene A Gene B PMID Method Quality ASK11 EBF1 12169662,14749489,23166809 0018,0018,0018 LC ASK12 EBF1 14749489,23166809 0018,0018 LC ASK14 EBF1 23166809 0018 LC SRK2A EBF1 14675532 0018 LC SKP1A EBF1 23166809,12169662,14675533,14749489,14675533 0018,0018,0018,0018,0096 LC Q945P2 EBF1 21798944 0397 HT F5D21.23 EBF1 21798944,21798944 0018,0397 HT TOP6B EBF1 14675533,14675532,15090654,21737749,14675533 0096,0018,0018,0809,0018 LC SKP1B EBF1 21798944,23166809,12169662,14675533,14749489,21798944,21798944 0096,0018,0018,0018,0018,0018,0397 HT,LC ASK4 EBF1 23166809 0018 LC VHA-D2 EBF1 21798944,21798944 0018,0397 HT ASK13 EBF1 12169662,23166809 0018,0018 LC EBF1 EIL1 14675533 0018 LC EBF1 ASK18 12169662,23166809 0018,0018 LC SRK2A EBF1 14675533 0096 LC SKP1A EBF1 21798944,14675533,14675533 0096,0018,0096 LC CUL1 EBF1 14675533 0096 LC TOP6B EBF1 14675533,14675533 0096,0018 LC SKP1B EBF1 21798944,21798944,21798944 0096,0018,0397 LC EBF1 ABCG36 26315018 0096 LC

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q9XIE2 Q9SKK0 ABCG36 EBF1 0.309 26315018 Q9SKK0 Q9LHA4 EBF1 VHA-D2 0.286 21798944 Q9SY65 Q9SKK0 ASK18 EBF1 0.332 12169662,23166809 Q9SLH0 Q9SKK0 EIL1 EBF1 0.523 14675533 Q9SKK0 O24606 EBF1 EIN3 0.876 14675532,14675533,15090654 Q9SKK0 O49484 EBF1 ASK11 0.702 12169662,14749489,23166809 Q9SKK0 O65674 EBF1 ASK12 0.636 14749489,23166809 Q9SKK0 Q9FHW7 EBF1 SKP1B 0.876 12169662,21798944,14749489,14675533,23166809 Q9SKK0 Q39255 EBF1 SKP1A 0.88 12169662,14749489,14675533,21798944,23166809 Q9SKK0 Q945P2 EBF1 Q945P2 0.126 21798944 Q9SKK0 Q94AH6 EBF1 CUL1 0.454 14675533 Q9SKK0 Q9C553 EBF1 F5D21.23 0.126 21798944 Q9SKK0 O81057 EBF1 ASK14 0.183 23166809 Q9SKK0 P43291 EBF1 SRK2A 0.454 14675533,14675532 Q9SKK0 Q9M1X5 EBF1 ASK13 0.332 12169662,23166809 Q9SKK0 Q9LNT9 EBF1 ASK4 0.183 23166809