PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants O24407 P49677 - 9342315 - X 2 O24407 P49678 two hybrid 21798944 direct interaction X 2 O24407 F4JLC8 two hybrid 21798944 direct interaction X 2 O24407 Q9XFM0 two hybrid 21798944 direct interaction X 2 O24407 Q94AI7 two hybrid 22065421 direct interaction X 2 O24407 Q9ZSY8 two hybrid 21798944 direct interaction X 2 O24407 Q94AI7 two hybrid 21798944 direct interaction X 2 O24407 O24409 two hybrid 21798944 direct interaction X 2 O24407 Q9FGV1 two hybrid 21734647 physical association X 2 O24407 Q8RYC8 two hybrid 21734647 physical association X 2 O24407 Q9C8N7 two hybrid 21734647 physical association X 2 O24407 P49677 two hybrid 21734647 physical association X 2 O24407 P49678 two hybrid 21734647 physical association X 2 O24407 Q38822 two hybrid 21734647 physical association X 2 O24407 P33077 two hybrid 21734647 physical association X 2 O24407 Q38827 two hybrid 21734647 physical association X 2 O24407 Q9C966 two hybrid 21734647 physical association X 2 O24407 O24407 two hybrid 21734647 physical association X 2 O24407 Q9XFM0 two hybrid 21734647 physical association X 2 O24407 Q9M1R4 two hybrid 21734647 physical association X 2 O24407 Q8RYC6 two hybrid 21734647 physical association X 2 O24407 P49677 two hybrid array 21798944 physical association X 2 O24407 P49678 two hybrid array 21798944 physical association X 2 O24407 Q38822 two hybrid array 21798944 physical association X 2 O24407 Q9XFM0 two hybrid array 21798944 physical association X 2 O24407 P49677 two hybrid 9342315 physical association X 2 O24407 P93022 two hybrid 21734647 physical association X 2 O24407 Q9XED8 two hybrid 21734647 physical association X 2 O24407 P93024 two hybrid 21734647 physical association X 2 O24407 P33078 two hybrid 21734647 physical association X 2 O24407 Q38828 two hybrid 21734647 physical association X 2 O24407 Q38829 two hybrid 21734647 physical association X 2 O24407 Q38830 two hybrid 21734647 physical association X 2 O24407 Q0WU05 two hybrid 21734647 physical association X 2 O24407 Q38832 two hybrid 21734647 physical association X 2 O24407 O24408 two hybrid 21734647 physical association X 2 O24407 O24409 two hybrid 21734647 physical association X 2 O24407 Q8LAL2 two hybrid 21734647 physical association X 2 O24407 Q9ZSY8 two hybrid 21734647 physical association X 2 O24407 D3K0M2 two hybrid 21734647 physical association X 2 O24407 Q9FKM7 two hybrid 21734647 physical association X 2 O24407 Q9C5X0 two hybrid 21734647 physical association X 2 O24407 Q9ZTX8 two hybrid 21734647 physical association X 2 O24407 O24409 two hybrid array 21798944 physical association X 2 O24407 Q38829 two hybrid array 21798944 physical association X 2 O24407 Q94AI7 two hybrid array 21798944 physical association X 2 O24407 Q9ZSY8 two hybrid array 21798944 physical association X 2 Q38826 O24407 two hybrid 21734647 physical association X 2 P93830 O24407 two hybrid 21734647 physical association X 2

PPI - PINA Gene A Gene B Method Publications Species A Species B Interaction Type Source Database Interaction Identidiers Experimental Role(s) Interactor A Experimental Role(s) Interactor B IAA16 IAA26 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8585 bait prey IAA16 IAA34 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8592 bait prey IAA16 ARF22 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8380 prey bait IAA16 At3g15540 MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_1918 bait prey IAA16 IAA4 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8451 prey bait IAA16 IAA5 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8469 prey bait IAA16 IAA15 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8572 prey bait IAA16 ARF6 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8255 prey bait IAA16 IAA27 MI:0096(pull down)|MI:0397(two hybrid array)|MI:0018(two hybrid) 21734647,21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association)|MI:0407(direct interaction) (intact)|(intact)|(biogrid) UniProt_8586|UniProt_1922|BIOGRID_8628 bait|bait|bait prey|prey|prey IAA16 IAA11 MI:0096(pull down)|MI:0397(two hybrid array)|MI:0018(two hybrid) 21734647,21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association)|MI:0407(direct interaction) (intact)|(intact)|(biogrid) UniProt_8539|UniProt_1920|BIOGRID_11888 prey|bait|bait bait|prey|prey IAA16 IAA10 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8530 prey bait IAA16 IAA3 MI:0096(pull down)|MI:0397(two hybrid array) 21734647,21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association) (intact)|(intact) UniProt_8431|UniProt_1919 prey|bait bait|prey IAA16 IAA9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8520 prey bait IAA16 IAA8 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8505 prey bait IAA16 IAA13 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8557 prey bait IAA16 IAA14 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8563 prey bait IAA16 IAA12 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8547 prey bait IAA16 IAA1 MI:0397(two hybrid array)|MI:0018(two hybrid)|MI:0096(pull down) 21734647,21798944,9342315 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association)|MI:0915(physical association) (intact)|(intact)|(intact) UniProt_1916|UniProt_8095|UniProt_8396 bait|prey|prey prey|bait|bait IAA16 IAA2 MI:0397(two hybrid array)|MI:0096(pull down)|MI:0018(two hybrid) 21734647,21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0915(physical association)|MI:0407(direct interaction) (intact)|(intact)|(biogrid) UniProt_1917|UniProt_8414|BIOGRID_8844 bait|prey|bait prey|bait|prey IAA16 IAA17 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8582 bait prey IAA16 IAA18 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8583 bait prey IAA16 IAA19 MI:0018(two hybrid)|MI:0096(pull down) 21734647,21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_11889|UniProt_8584 bait|bait prey|prey IAA16 IAA32 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8590 bait prey IAA16 ARF19 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8349 prey bait IAA16 ARF8 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8296 prey bait IAA16 IAA31 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8589 bait prey IAA16 IAA33 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8591 bait prey IAA16 IAA30 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8588 bait prey IAA16 ARF7 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8280 prey bait IAA16 ARF5 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8229 prey bait IAA16 IAA28 MI:0018(two hybrid)|MI:0096(pull down)|MI:0397(two hybrid array) 21734647,21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association)|MI:0915(physical association) (biogrid)|(intact)|(intact) BIOGRID_13084|UniProt_8587|UniProt_9778 bait|bait|prey prey|prey|bait IAA16 ARF9 MI:0096(pull down) 21734647 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_8318 prey bait IAA16 TPL MI:0018(two hybrid)|MI:0018(two hybrid)|MI:0397(two hybrid array) 21798944,22065421 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(biogrid)|(intact) BIOGRID_8233|BIOGRID_11099|UniProt_1921 prey|prey|bait bait|bait|prey

PPI - HINT Gene A Gene B PMID Method Quality IAA16 IAA16 21734647 0018 LC IAA16 IAA18 21734647 0018 LC IAA16 IAA19 21734647,21798944,21798944 0018,0018,0397 LC,HT IAA16 IAA4 21734647 0018 LC IAA16 IAA5 21734647 0018 LC IAA16 IAA1 21734647,21798944,9342315 0018,0397,0018 LC,HT IAA16 IAA2 21734647,21798944,21798944 0018,0018,0397 LC,HT IAA16 ARF7 21734647,25566309 0018,0018 LC IAA16 ARF5 21734647,25566309 0018,0018 LC IAA16 IAA17 21734647 0018 LC IAA16 IAA3 21734647,21798944 0018,0397 LC,HT IAA16 IAA8 21734647 0018 LC IAA16 IAA9 21734647 0018 LC IAA16 IAA10 21734647 0018 LC IAA16 IAA11 21734647,21798944,21798944 0018,0018,0397 LC,HT IAA16 IAA12 21734647 0018 LC IAA16 IAA13 21734647 0018 LC IAA16 IAA14 21734647 0018 LC IAA16 IAA31 21734647 0018 LC IAA16 IAA26 21734647 0018 LC IAA16 IAA32 21734647 0018 LC IAA16 ARF19 21734647 0018 LC IAA16 TPL 22065421,21798944,21798944 0018,0018,0397 LC,HT IAA16 IAA34 21734647 0018 LC IAA16 ARF22 21734647 0018 LC IAA16 IAA15 21734647 0018 LC IAA16 ARF8 21734647,25566309 0018,0018 LC IAA16 IAA33 21734647 0018 LC IAA16 IAA30 21734647 0018 LC IAA16 ARF9 21734647 0018 LC IAA16 IAA28 21734647,21798944,21798944 0018,0018,0397 LC,HT IAA16 IAA27 21734647,21798944,21798944 0018,0018,0397 LC,HT IAA16 ARF6 21734647,25566309 0018,0018 LC IAA16 ARF4 25566309 0018 LC

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q9ZTX9 O24407 ARF4 IAA16 0.183 25566309 Q9XFM0 O24407 IAA28 IAA16 0.523 21734647,21798944 Q2VWA2 O24407 Q2VWA2 IAA16 0.126 21798944 O24409 O24407 IAA19 IAA16 0.454 21734647,21798944 Q9C966 O24407 IAA15 IAA16 0.183 21734647 Q94AI7 O24407 TPL IAA16 0.416 21798944,22065421 Q9ZSY8 O24407 IAA27 IAA16 0.523 21734647,21798944 Q8RYC6 O24407 IAA32 IAA16 0.332 21734647 Q8RYC8 O24407 ARF19 IAA16 0.332 21734647 Q9C8N7 O24407 ARF22 IAA16 0.332 21734647 Q38829 O24407 IAA11 IAA16 0.523 21734647,21798944 Q38830 O24407 IAA12 IAA16 0.332 21734647 Q38831 O24407 IAA13 IAA16 0.332 21734647 P93830 O24407 IAA17 IAA16 0.332 21734647 O24407 O24407 IAA16 IAA16 0.376 21734647 O24408 O24407 IAA18 IAA16 0.332 21734647 P49678 O24407 IAA2 IAA16 0.523 21734647,21798944 Q38826 O24407 IAA8 IAA16 0.332 21734647 Q38827 O24407 IAA9 IAA16 0.332 21734647 Q38828 O24407 IAA10 IAA16 0.332 21734647 Q38832 O24407 IAA14 IAA16 0.332 21734647 Q8H174 O24407 IAA31 IAA16 0.332 21734647 Q8LAL2 O24407 IAA26 IAA16 0.332 21734647 Q9C5X0 O24407 IAA34 IAA16 0.332 21734647 Q9FKM7 O24407 IAA33 IAA16 0.332 21734647 Q9M1R4 O24407 IAA30 IAA16 0.332 21734647 Q9XED8 O24407 ARF9 IAA16 0.332 21734647 P33077 O24407 IAA4 IAA16 0.332 21734647 P33078 O24407 IAA5 IAA16 0.332 21734647 Q38822 O24407 IAA3 IAA16 0.416 21734647,21798944 Q9ZTX8 O24407 ARF6 IAA16 0.454 21734647,25566309 P49677 O24407 IAA1 IAA16 0.597 9342315,21734647,21798944 Q9FGV1 O24407 ARF8 IAA16 0.454 21734647,25566309 P93022 O24407 ARF7 IAA16 0.454 21734647,25566309 P93024 O24407 ARF5 IAA16 0.454 21734647,25566309