PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants Q8L471 Q93YQ1 two hybrid 21798944 direct interaction X 2 Q93YQ1 Q8W4I9 two hybrid 15720729 direct interaction X 2 Q93YQ1 P42818 affinity chromatography technology 16377759 physical association X 2 Q93YQ1 F4I4X6 affinity chromatography technology 16377759 physical association X 2 Q93YQ1 Q8VZ84 two hybrid 21798944 direct interaction X 2 Q93YQ1 two hybrid 21798944 direct interaction X 2 Q8L471 Q93YQ1 two hybrid array 21798944 physical association X 2 Q93YQ1 Q8W4I9 two hybrid 15720729 physical association X 2 Q6NMK5 Q93YQ1 two hybrid array 21798944 physical association X 2 Q93YQ1 Q8VZ84 two hybrid array 21798944 physical association X 2 Q93YQ1 Q8VZ84 two hybrid array 21798944 physical association X 2

PPI - PINA Gene A Gene B Method Publications Species A Species B Interaction Type Source Database Interaction Identidiers Experimental Role(s) Interactor A Experimental Role(s) Interactor B RAPTOR1 ML1 MI:0018(two hybrid)|MI:0018(two hybrid) 15720729 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact) BIOGRID_2616|UniProt_12891 prey|bait bait|prey uniprotkb:(gene name) RAPTOR1 MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (intact) UniProt_3067 bait prey RAPTOR1 TOR MI:0004(affinity chromatography technology) 16377759 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (biogrid) BIOGRID_3127 prey bait RAPTOR1 F16M2.6 MI:0018(two hybrid)|MI:0397(two hybrid array)|MI:0397(two hybrid array) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association)|MI:0915(physical association) (biogrid)|(intact)|(intact) BIOGRID_9626|UniProt_6466|UniProt_6729 bait|prey|bait prey|bait|prey At3g22550 RAPTOR1 MI:0397(two hybrid array)|MI:0018(two hybrid) 21798944 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association)|MI:0407(direct interaction) (intact)|(biogrid) UniProt_6728|BIOGRID_9624 prey|prey bait|bait ATPK1 RAPTOR1 MI:0004(affinity chromatography technology) 16377759 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (biogrid) BIOGRID_3126 bait prey

PPI - HINT Gene A Gene B PMID Method Quality ARSK1 RAPTOR1 21798944 0018 HT Q6NMK5 RAPTOR1 21798944 0397 HT Q8L471 RAPTOR1 21798944,21798944 0018,0397 HT MARD1 RAPTOR1 21798944,21798944 0018,0397 HT ML1 RAPTOR1 15720729 0018 LC ATPK1 RAPTOR1 16377759 0004 LC RAPTOR1 TOR 16377759 0004 LC

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q93YQ1 Q8LGS1 RAPTOR1 MARD1 {ECO:0000303|PUBMED:15159630} 0.376 21798944 Q9FR53 Q93YQ1 TOR RAPTOR1 0.21 16377759 Q93YQ1 Q8W4I9 RAPTOR1 ML1 0.523 15720729 Q93YQ1 O64842 RAPTOR1 PBL12 {ECO:0000303|PUBMED:20413097} 0.286 21798944 Q93YQ1 Q8L471 RAPTOR1 Q8L471 0.126 21798944 Q93YQ1 P42818 RAPTOR1 ATPK1 0.21 16377759