PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants Q9LTT8 Q9LTT8 affinity chromatography technology 17158604 physical association X 2 Q9SJF3 Q9LTT8 affinity chromatography technology 17158604 physical association X 2 Q9SJF3 Q9LTT8 pull down 17158604 direct interaction X 2 Q9FYE1 Q9LTT8 enzymatic study 23964026 direct interaction X 2 Q8GW31 Q9LTT8 affinity chromatography technology 17158604 physical association X 2 Q8GW31 Q9LTT8 pull down 17158604 direct interaction X 2 Q1EC66 Q9LTT8 affinity chromatography technology 23667124 physical association X 2 Q9LTT8 anti tag coimmunoprecipitation 24556609 association C 55 Q9LTT8 anti tag coimmunoprecipitation 24556609 association C 51 Q9LTT8 anti tag coimmunoprecipitation 24556609 association C 54 Q9LTT8 anti tag coimmunoprecipitation 24556609 association C 38 Q9LTT8 anti tag coimmunoprecipitation 24556609 association C 50 Q9SJF3 Q9LTT8 pull down 22407295 direct interaction X 2 Q9LTT8 anti tag coimmunoprecipitation 24556609 association C 19

PPI - PINA Gene A Gene B Method Publications Species A Species B Interaction Type Source Database Interaction Identidiers Experimental Role(s) Interactor A Experimental Role(s) Interactor B UBQ3 VCS MI:0004(affinity chromatography technology) 23667124 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0915(physical association) (biogrid) BIOGRID_18432 bait prey DCP2 VCS MI:0004(affinity chromatography technology)|MI:0004(affinity chromatography technology) 17158604 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(biogrid) BIOGRID_3046|BIOGRID_3043 prey|prey bait|bait VCS At1g08370 MI:0004(affinity chromatography technology)|MI:0007(anti tag coimmunoprecipitation)|MI:0004(affinity chromatography technology) 17158604,22407295 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction)|MI:0407(direct interaction)|MI:0915(physical association) (biogrid)|(intact)|(biogrid) BIOGRID_3047|UniProt_9552|BIOGRID_3044 bait|bait|bait prey|prey|prey AMC9 VCS MI:0415(enzymatic study) 23964026 taxid:3702(Arabidopsis thaliana) taxid:3702(Arabidopsis thaliana) MI:0407(direct interaction) (biogrid) BIOGRID_17812 bait prey

PPI - HINT Gene A Gene B PMID Method Quality AMC9 VCS 23964026 0415 LC SYP22 VCS 24556609,24556609 0004,0007 HT SYP21 VCS 24556609,24556609 0004,0007 HT KN VCS 24556609,24556609 0004,0007 HT DCP2 VCS 17158604,17158604 0096,0004 LC SYP132 VCS 24556609,24556609 0004,0007 HT VCS VCS 17158604 0004 LC VCS Q9SJF3 22407295,17158604,17158604 0096,0096,0004 LC VCS SYP43 24556609,24556609 0004,0007 HT VCS SYP123 24556609,24556609 0004,0007 HT

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q9LTT8 Q1EC66 VCS UBQ3 0.126 23667124 Q9LTT8 Q9FYE1 VCS AMC9 0.183 23964026 Q9LTT8 Q9LTT8 VCS VCS 0.236 17158604 Q9ZQZ8 Q9LTT8 SYP123 VCS 0.236 24556609 Q9LTT8 Q8GW31 VCS DCP2 0.454 17158604 Q9LTT8 Q8VZU2 VCS SYP132 0.236 24556609 Q9SUJ1 Q9LTT8 SYP43 VCS 0.236 24556609 Q9LTT8 P93654 VCS SYP22 0.236 24556609 Q9LTT8 Q39233 VCS SYP21 0.236 24556609 Q9LTT8 Q42374 VCS KN 0.236 24556609 Q9SJF3 Q9LTT8 Q9SJF3 VCS 0.623 17158604,22407295